| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2249 |
|---|
| Symbol | |
|---|
| ID | 3581470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2648713 |
|---|
| End bp | 2649672 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637685957 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290305 |
|---|
| Protein GI | 72162648 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2035] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGT CACTCGGCAC TCATCTCCTC AACGGCGTAC GCGGCACCCT GATCGGAACC
GCCGAAACCG TCCCCGGAAT CAGCGGCGGT ACTGTCGCCC TCATCACCGG TGTCTACGAG
TCCCTCATCA ACTCCGCGGG CCACGTCGTC ACCGCGGTGC GACTGCTCGT CACCGACCTC
CTCCGCGGAA AAGGCCTGGC GCGGGCCCGC GCCGAACTCA CCCGCGCCGA CTGGGGGACC
GTCCTGGCCG TGCTCGTGGG CATGGTGCCC GCCGTGCTGG TCGCAGCCCG CGTCATCGCC
CCGCTGGTTG AGCACAATCC GGCTGAATCG CACGCCTTGT TCTTCGGCTT GGTGCTGGCG
TCCCTGTGGG TGCCCTACAG CAGTTCGGGT CGGCGCTGGC GGATCGGCGA CTACCTGCTC
GCCCTGCTCA TGGCCGCGGC CGCGTTCCTG TTCACCGGCG TCCCGTCCAC GACCGTGGAC
CCGCACCCCC TCATCGTCAT GGCCGCGGCT GCCGTCGCGA TCTGCGCGCT CGTCCTGCCC
GGCATCTCCG GCTCGTTCAT CCTGCTCACC GTCGGCCTGT ACCTCCCGAC GATGGAGGCG
CTCAACAACC GCGACCTCGG CTACATCGCG ACCTTTGTCC TAGGCGCGAC CATCGGCCTG
TCCCTGTTCG TCAAACTGCT GCAGTTCCTG CTGGACCGCT TCCACCACCT CACCCTGGTG
GTGATGACCG GGCTGATGGC GGGATCCCTG CGGGCGCTGT GGCCGTGGCA GGACGACGAC
CGGACCCTGC TCGCCCCCAG CCAGGACAAC CTCGTGCTCT GCATCGTGCT GGCGTTGGTC
GGCGCGGCCG CCGTGATCAC CGTCATCGTG ATCGAACACC GGATCAAGGC CCGCGCAGCG
CACGACGCCT CCGTTGCCCC AGAAGTGCGT CCGCAGACGA ACGACACGGT CGTGCAGTAG
|
|---|
| Protein sequence | MAKSLGTHLL NGVRGTLIGT AETVPGISGG TVALITGVYE SLINSAGHVV TAVRLLVTDL
LRGKGLARAR AELTRADWGT VLAVLVGMVP AVLVAARVIA PLVEHNPAES HALFFGLVLA
SLWVPYSSSG RRWRIGDYLL ALLMAAAAFL FTGVPSTTVD PHPLIVMAAA AVAICALVLP
GISGSFILLT VGLYLPTMEA LNNRDLGYIA TFVLGATIGL SLFVKLLQFL LDRFHHLTLV
VMTGLMAGSL RALWPWQDDD RTLLAPSQDN LVLCIVLALV GAAAVITVIV IEHRIKARAA
HDASVAPEVR PQTNDTVVQ
|
|---|
| |