| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2195 |
|---|
| Symbol | tig |
|---|
| ID | 3581411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2577887 |
|---|
| End bp | 2579278 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637685900 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_290251 |
|---|
| Protein GI | 72162594 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACCG CTGTCGAGGA GCTGAGCCCC ACCCGGGTCA AGCTGACTAT CGAGGTTCCG
TTTGAGGAAC TCGACCATGC CTTCGACGTG ACCTACAAGT CGCTCGCCAA GCAGGTCCGG
ATCAAGGGGT TCCGGCCAGG AAAGGCTCCG GCGAAGCTCA TCGACCGCTA CGTCGGCCGC
GGAGCGGTGC TCACCCAGGC GGTCAACCAC GCGGTCCCCG AGCTCTACAG CGAGGCCGTG
AGCAAGGAGG AAGTCCCCGT CCTCGGACCG CCTGAGGTGG AGATCACCCG CTTGGAGGAC
GGCAAGGAGC TGGCCTTCAC CGCCGAAGTC GACGTCCGCC CCAAGTTCGA GGTCACCGAC
TACGAGGGCA TCGAGGTCAC CGTCGACGAC GCCGAGGTCA CCGAGGAGCA GGTCAACGAG
CGCCTCGAGG CGCTGCGGCA GCGCTTCGCC ACCCTCATCG GCGTCGACCG GCCTGCCGAG
CAGGGCGACC ACGTCTCGAT CGACCTGTCC GCCTCGGTCG ACGGCAAGAA GCTGGAGGAC
GCGCAGGCCA GCGGGGTCTC CTACGAGATC GGCGCCGGCA CCCTGCTGCA GGGCCTCGAC
GAGGCGATCA TCGGCCTGAG CGCGGGAGAG TCCGCCACCT TCACCACCAC CCTGGTGGGC
GGGGAGCACA AGGGCCGCGA AGCCGACGTC ACGGTCACCG TGCACAGTGT CAAGCTCAAG
GAGCTCCCCG AGCTCGACGA CGAGTTCGCC CGCCTGGCCA GCGAGTTCGA CACCATCGAA
GAGCTGCGTG CCAGCGAAGC CGAGCGGCTC GGCGAACTGC TCCGCGCTCA ACAGCTCCGC
CAGGCCCGCG ACCGCGTCCT TGAAAAGCTC GTCGACTCCA TCGACATCCC GCTGCCGGAA
AGCGTGATCA AGCAGGAGGC CGACCGCCGC CGTGAACTCC TGGACCGGCA GCTCTCCCAG
AGCGGTCTGA GCAAGGAGGC CTACCTCGAG GCCCAGGAGA AGACCGAGGA GGAGTTCGAA
GCCGAGCTCA CCGAGAACGC CACCCGCGCC GTCAAGACCG GCTTCGTTCT CGACCAGCTC
GCCTCCCAGG AGAACCTGAC CGCGAGCAAC GAAGAGCTGA CCCAGTACGT CGTCGAGCAG
GCCCAGAGCA TGGGCATCTC GCCCGACCAG CTCTTCCAGA GCCTCATGCA GGCCAACCAG
CTCCAGCTGG TCTACGTCGA GGTGCTGCGG GCCAAGGCAC TCGACCTGGT GGTGTCCAAG
GCCAAGATCA CCGACGAGTC CGGCAACACC ATCGAGCCTC CGACCCCGGT CCACACGGAG
ACCATCACGG TCGCCTCCGG GGATGAGGAG ACCGAGGAGT CCGCGGCAGA GCAGGGCGAA
ACCGAAAAAT AG
|
|---|
| Protein sequence | MKTAVEELSP TRVKLTIEVP FEELDHAFDV TYKSLAKQVR IKGFRPGKAP AKLIDRYVGR
GAVLTQAVNH AVPELYSEAV SKEEVPVLGP PEVEITRLED GKELAFTAEV DVRPKFEVTD
YEGIEVTVDD AEVTEEQVNE RLEALRQRFA TLIGVDRPAE QGDHVSIDLS ASVDGKKLED
AQASGVSYEI GAGTLLQGLD EAIIGLSAGE SATFTTTLVG GEHKGREADV TVTVHSVKLK
ELPELDDEFA RLASEFDTIE ELRASEAERL GELLRAQQLR QARDRVLEKL VDSIDIPLPE
SVIKQEADRR RELLDRQLSQ SGLSKEAYLE AQEKTEEEFE AELTENATRA VKTGFVLDQL
ASQENLTASN EELTQYVVEQ AQSMGISPDQ LFQSLMQANQ LQLVYVEVLR AKALDLVVSK
AKITDESGNT IEPPTPVHTE TITVASGDEE TEESAAEQGE TEK
|
|---|
| |