Gene Tfu_2108 details

Gene Information

• Locus tag: Tfu_2108
• Symbol: thrS
• ID: 3581042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2468083
• End bp: 2470062
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637685804
• Product: threonyl-tRNA synthetase
• Protein accession: YP_290164
• Protein GI: 72162507
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0249058
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCGCCG TGCCTGAACT GCGTATCACC CTCGCCGGAA CCGAGCGTGT GGTGGCGGCA 
GGCACTACGG CGGGACAGGC GCTAGAAGCG GACGGGCGAA CCGTGATCGC CGCGCTGGTC 
AACGGGGAGC CGCGAGACCT CACCCACGAG CTCGCCGACG GCGATGTGGT GGAGGAAATC 
CGCATCGACT CTGAAGAGGG ACGCGCGATC CTGCGCCACT CGTGCGCCCA CGTGCTCGCC 
CAAGCCGTCC AAGAACTGTT CCCCGAAGCC AAGCTGGGTA TCGGCCCGCC GATCGAGAAC 
GGCTTCTACT ACGACTTCGA CGTCGCTGAG CCGTTCACTC CGGACGATCT CAAACGCATC 
GAAAAGCGGA TGCAGGAGAT CATCAAGCAG GGCCAGCGCT TCTCCCGGCG TGCCGTCACC 
GACGAGGACG CTCGAGCAGA ACTCGCTGAC GAGCCGTACA AGCTGGAGCT CATCGAGCTC 
AAGGGCGGCG CGGCCGAGGC CGCCGAAGGA GCCGGTGTCG AAGTTGGTGC GGGGCAGCTC 
ACCATCTACG ACAACCTGCA CCCCCGCACC GGCGAGGTGT GCTGGAAGGA CCTGTGCCGC 
GGTCCGCACC TGCCCGACAC TCGGGCCATC CCCGCGTTCA AGCTGATGCG CACCGCCGCC 
GCCTACTGGC GCGGCAGCGA GAAGAACCCT CAGCTCCAGC GGATCTACGG CACCGCCTGG 
GAGACGAAGG ACGCGCTCAA GTCCTACCTC ACCATGCTGG AGGAGGCCGC CAAGCGCGAC 
CACCGCAAGC TCGGCGTGGA ACTCGACCTG TTCTCCTTCC CCGACGAGCT CGGCTCCGGC 
CTGGCCGTGT TCCACCCCAA GGGCGGCGTG GTCCGCAAGG TGATGGAGGA GTACTCGCGC 
CGCCGCCACG AAGAGGCCGG CTACCAGTTC GTCAACACGC CGCACATCTC CAAGGCCGGG 
CTGTTTGAGA CGTCCGGGCA CCTGCCGAAC TACGCGGACG CCATGTTCCC GCCCATCCAG 
TTCGAGGGGG CCGACTACTA CCTCAAGGCC ATGAACTGCC CCATGCACAA CCTGATCTAC 
CGGTCACGGG GCCGTTCCTA CCGGGAGCTT CCGCTGCGGC TGTTCGAGTT CGGCACGGTC 
TACCGGTACG AGAAGTCCGG CGTGGTGCAC GGGCTGACCC GGGCACGCGG GTTCACCCAG 
GACGACGCGC ACATCTACTG CACCAAGGAG CAGATGCCGG ACGAGCTGGA CCGGCTGCTC 
ACCTTCGTGC TAGACCTGCT GCGCGACTAC GGCCTGAGCG ACTTCTACCT CGAGCTGTCC 
ACCCGCGACG ACTCGCCGAA GTTCATCGGA GAGCCGCAAG AGTGGGAGGA AGCCACCGAG 
ATCCTGCGGC AGGCCGCGCA GAAGCAGAAC CTGGAACTGG TCATGGACGC CGGCGGCGCG 
GCCTACTACG GTCCGAAGAT CTCGGTGCAG GCCAAGGACG CCATCGGCCG GACCTGGCAG 
ATGTCCACCA TCCAAGTGGA CTTCCAGCAG CCCAAGCGCT TCGAGCTCGA ATACCAGGCT 
GCCGACGGCA GCCGGCAGCG GCCGGTGATG ATCCACCGCG CCCTGTTCGG TTCCATCGAA 
CGCTTCTTCG CGGTGCTGCT GGAGCACTAC GCGGGCGCCT TCCCCGCCTG GCTGGCCCCG 
GTCCAGGTCG TGGGCATTCC AATCGCGAGC GAGCACGTGC CCTACTTGGA GGACGTGGCG 
CGTCGGCTGC GGGAGCACGG GGTGCGCGTC GAAGTGGACG CCAGCGACGA CCGCATGCAG 
AAGAAGATCC GCAACGCCCA GAAGCAGAAA ATCCCCTTCA TGCTGCTGGC GGGCGACAAC 
GACGTCAGCA AGGGCGCGGT GTCCTTCCGC TACCGCGACG GTTCGCAGAA CAACGGCGTC 
CCGATCGACA AGGCGATCGA GGAGATCCTC ACCGTGATCC GGGAACGCCG CCAAGTGTGA 

 

Protein sequence

MSAVPELRIT LAGTERVVAA GTTAGQALEA DGRTVIAALV NGEPRDLTHE LADGDVVEEI 
RIDSEEGRAI LRHSCAHVLA QAVQELFPEA KLGIGPPIEN GFYYDFDVAE PFTPDDLKRI 
EKRMQEIIKQ GQRFSRRAVT DEDARAELAD EPYKLELIEL KGGAAEAAEG AGVEVGAGQL 
TIYDNLHPRT GEVCWKDLCR GPHLPDTRAI PAFKLMRTAA AYWRGSEKNP QLQRIYGTAW 
ETKDALKSYL TMLEEAAKRD HRKLGVELDL FSFPDELGSG LAVFHPKGGV VRKVMEEYSR 
RRHEEAGYQF VNTPHISKAG LFETSGHLPN YADAMFPPIQ FEGADYYLKA MNCPMHNLIY 
RSRGRSYREL PLRLFEFGTV YRYEKSGVVH GLTRARGFTQ DDAHIYCTKE QMPDELDRLL 
TFVLDLLRDY GLSDFYLELS TRDDSPKFIG EPQEWEEATE ILRQAAQKQN LELVMDAGGA 
AYYGPKISVQ AKDAIGRTWQ MSTIQVDFQQ PKRFELEYQA ADGSRQRPVM IHRALFGSIE 
RFFAVLLEHY AGAFPAWLAP VQVVGIPIAS EHVPYLEDVA RRLREHGVRV EVDASDDRMQ 
KKIRNAQKQK IPFMLLAGDN DVSKGAVSFR YRDGSQNNGV PIDKAIEEIL TVIRERRQV