Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2099 |
Symbol | |
ID | 3581033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2459917 |
End bp | 2461005 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685795 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_290155 |
Protein GI | 72162498 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.18132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAA CCCGCACCCG CAGACTCCGC AATGTCCGTA AAAGCGGACA AAACCGGATC TACCATAGAT GGGGCGTGTG CGGGAGGGCG CCGTCAACAT CGCACACCCC ACCCAATAAG ATCCACTTCG CATTCAAGCG TGAAGTCGTG TCCATCGAGA ACCTGGAGTC CACAGCCGTG ACCAACACCG CCGAGAACAC AACCGAAAGC ACGGTCGGTA CCGTCCGCGT CAAACGCGGC ATGGCCGAAC AGCTCAAGGG CGGTGTGATC ATGGATGTGG TCACGCCGGA GCAGGCCAAG ATCGCTGAAG ACGCCGGCGC AGTCGCCGTC ATGGCGCTGG AGCGTGTCCC CGCCGACATC CGCAAGGACG GCGGTGTGGC CCGCATGTCC GACCCGGAGA TGATCGAGGG CATCATCAAC GCCGTGTCCA TCCCGGTCAT GGCGAAGGTC CGCATCGGCC ACTTCGTCGA AGCCCAAGTC CTCCAGGCCC TGGAAGTGGA CTTCATCGAC GAGTCCGAGG TCCTCACCCC CGCTGATGAG ACCAACCACA TCAACAAGTG GGACTTCACC GTGCCGTTCG TGTGCGGTGC CACCAACCTG GGTGAGGCCC TGCGCCGCAT CGCCGAAGGC GCGGCCCTGA TCCGCTCCAA GGGAGAGGCC GGTACCGGCA ACGTGGTCGA AGCCGTCCGC CACATGCGGC AGATCACCTC CGAGATCCGG CGGCTCACCC AACTGGACGA CGCCGAGCTC TTCGCTGCCG CCAAGGAACT GCGGGCCCCC TACGAACTCG TCCGGGAGGT CGCCCGGGAA GGCAAGCTGC CCGTGCCCCT GTTCTCCGCC GGAGGCGTCG CTACCCCCGC AGACGCCGCC CTCATGCGCC AGCTCGGCGC GGAGAGCGTC TTCGTCGGCT CGGGCATCTT CAAGTCCGGG GACCCGGCCA AGCGAGCCAA GGCCATCGTG GAAGCCACCA CCGCCTACGA CGACCCGCAC ACCATCGCTC GGGTCTCCCG CGGCCTCGGG GAAGCCATGG TCGGGATCAA CCTCGACGAA CTGGACGCTT CCCAGCGCTA CGCGGGCCGC GGCTGGTAG
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Protein sequence | MAQTRTRRLR NVRKSGQNRI YHRWGVCGRA PSTSHTPPNK IHFAFKREVV SIENLESTAV TNTAENTTES TVGTVRVKRG MAEQLKGGVI MDVVTPEQAK IAEDAGAVAV MALERVPADI RKDGGVARMS DPEMIEGIIN AVSIPVMAKV RIGHFVEAQV LQALEVDFID ESEVLTPADE TNHINKWDFT VPFVCGATNL GEALRRIAEG AALIRSKGEA GTGNVVEAVR HMRQITSEIR RLTQLDDAEL FAAAKELRAP YELVREVARE GKLPVPLFSA GGVATPADAA LMRQLGAESV FVGSGIFKSG DPAKRAKAIV EATTAYDDPH TIARVSRGLG EAMVGINLDE LDASQRYAGR GW
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