Gene Tfu_2008 details

Gene Information

• Locus tag: Tfu_2008
• ID: 3580881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2346348
• End bp: 2347070
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637685701
• Product: putative secreted glycosyl hydrolase
• Protein accession: YP_290064
• Protein GI: 72162407

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGGCG CCATGGCCGT CGACGATGAC GGGCGCGGCA TGTGGACCAC CGGATACGGC 
CACGGCGACG CCCTGCACGT CGGCGACTTC GTCCCCGCCC GGCCCGGACT CGAGGTGTAC 
GGGGTTTCCG AAAGCTCCTC GCAGCCCAAC GCTTGGCTCG CCGACGCGCG CACAGGAAGC 
ACCCTGTGGC GCACCGCCTC CGGCGACGAC AACGGGCGCG GCGTCGCCGG AGATATCTGG 
GCAGGCAGCC CCGGCGCCGA ATTCTGGTCC TCACGGGTGG ACGGCCTACT CAACACCTCC 
GGAACCGCCA TCGGCCGCAA ACCCAGCTCG ATCAACTTCC TCGTCTGGTG GGACGGAGAC 
CCCAGCCGGG AACTGCTGGA CCAGACCCGG ATCGACAAGT ACGGTCCGAA CGGCGACACG 
CGCCTGCTCA CGGGCAGCGG TGTGGCCTCC AACAACGGCA CCAAAGCCAC CCCGTCCCTG 
TCCGGCGACA TCCTCGGCGA CTGGCGCGAA GAGGTGATCT GGCGGACCAG CGACAACTCG 
GCGCTGCGGA TCTACGCCAG CCCGCACCCC ACGGAACTGC GGATCCCCAC CCTGATGCAT 
GACACCCAGT ACCGGGTAGC GATCGCCTGG CAGAACACCG CATACAACCA GCCGCCGCAC 
CCGTCCTTCC CCATCGGAGA CGGCATGGCG CCGCCGCCGT GGCCGGACAT CTACTACCCC 
TGA 

 

Protein sequence

MFGAMAVDDD GRGMWTTGYG HGDALHVGDF VPARPGLEVY GVSESSSQPN AWLADARTGS 
TLWRTASGDD NGRGVAGDIW AGSPGAEFWS SRVDGLLNTS GTAIGRKPSS INFLVWWDGD 
PSRELLDQTR IDKYGPNGDT RLLTGSGVAS NNGTKATPSL SGDILGDWRE EVIWRTSDNS 
ALRIYASPHP TELRIPTLMH DTQYRVAIAW QNTAYNQPPH PSFPIGDGMA PPPWPDIYYP