Gene Tfu_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2005 
Symbol 
ID3580742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2342256 
End bp2343860 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content68% 
IMG OID637685698 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_290061 
Protein GI72162404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGGCA CGCTCAGCCG GACCAGCCAC GACCGCGATT CACCCAGGGA GGACGCCGAC 
GTGAAAGAAC CGGTGATGCC GGGAGCGGTC CCCAACCCGC TGCGCAGTGT GCTGGACCGG
CGGTTACCGC GGATTGCCGG CCCGTGTGTG CTCGTCCTCT TCGGGGTCAC GGGCGACCTG
TCCCGCAAGA AGCTGCTTCC CGCTATTTAC GACCTGGCGA ACCGAGGGCT GCTACCGCCC
GGTTTCGGAC TCGTGGGATT CGCCCGCCGG GACTGGGCCG ACCAGGACTT CACCCAGGTC
GCCTATGACG CGGTCCGTAC GCATGCGCGC ACCCCGTTCC GGGAAGACGT GTGGCGCCAG
TTGAGCGAGG GGGTGCGGTT CGTCCCCGGC GAGGCGCATG ACGACGCCGC GTTTGATGCG
CTGGTGCGCA CCGTGCGGGA ACTGGACGAG AGCCGGGGCA CCGGCGGCAA TTACGCGTTC
TACCTTTCGC TTCCCCCGAA ACTGTTCCCC ACGGTGCTCA CCCAGTTGAA GCGGAGCGGC
CTGGCGGAGA GCTCGGGGGA CTCGTGGCGG CGGGTGGTGA TCGAGAAGCC GTTCGGCCAC
GACCTGGCCA GCGCCCAGGA GCTCAACGCC CTCGTCGACG ACGTGTTCCC ACCGCACTCC
GTGTTCCGTA TCGACCACTA CTTGGGGAAG GAAACCGTCC AGAACCTGCT GGCGCTGCGT
TTCTCCAACA CCCTGTTCGA GCCGATCTGG AACCGCTCGT ATATCGACCA CGTCCAGATC
ACCATGGCCG AGGACATCGG GGTGGGGGGA CGCGCCGGGT ACTACGACGG TATCGGGGCG
GCGCGCGACG TCATCCAGAA CCACCTGCTG CAGCTCCTCG CCCTGGTCGC GATGGAGGAA
CCGCTGTCCT TCACCGCGGA CGCGATCCGC GCGGAGAAGG TCAAAGCGTT GTCCGCGGTC
CAACTCCCCG ACGATCTTGC GACCGGGACC GCGCGCGGCC AGTACACCGC GGGCTGGCAG
GGCGGCGCCT GGGTTCCCGG CTACTTGGAG GAAGAAGGCA TCCCCCCGAA CTCCACCACG
GAGACGTACG CGGCCATGCG GCTGGGGGTG AACACGCGGC GCTGGGCGGG CGTCCCGTTC
TACCTGCGCA CGGGGAAACG CCTGGGGCGG CGGGTCACCG AGGTCGCACT GGTGTTCCAC
CGCACCGCCA ACCAGGTGTT CGACCATGTT GCCACCGCCA ACCAGGGCGC CAACTCCTTG
GTGATCCGGA TCCAGCCGGA TGAGGGGGTG ACGTTGCGGT TCGGCTCCAA AGTCCCCGGG
ACCGCCATGG AGGTGCGCGA TGTCAGCATG GACTTCAGCT ACGGCGCGTC CTTCACCGAA
ACCAGTCCGG AAGCCTACGA GCGGCTGATC CTCGACGTGC TCATCGGCGA TCCTCCGCTC
TTCCCCCACC AGGAAGAAGT AGAGCTGTCG TGGCGGATCC TCGACCCGGT CGAGGAGTTC
TGGGCCAAGA ACGGCCGCCC CGAACCCTAC CCGGCGGGTA GCTGGGGCCC GCCCAGCGGC
CACGAGCTGC TGGCCCGCGA CAACCGTACG TGGCGCAGAC CATGA
 
Protein sequence
MPGTLSRTSH DRDSPREDAD VKEPVMPGAV PNPLRSVLDR RLPRIAGPCV LVLFGVTGDL 
SRKKLLPAIY DLANRGLLPP GFGLVGFARR DWADQDFTQV AYDAVRTHAR TPFREDVWRQ
LSEGVRFVPG EAHDDAAFDA LVRTVRELDE SRGTGGNYAF YLSLPPKLFP TVLTQLKRSG
LAESSGDSWR RVVIEKPFGH DLASAQELNA LVDDVFPPHS VFRIDHYLGK ETVQNLLALR
FSNTLFEPIW NRSYIDHVQI TMAEDIGVGG RAGYYDGIGA ARDVIQNHLL QLLALVAMEE
PLSFTADAIR AEKVKALSAV QLPDDLATGT ARGQYTAGWQ GGAWVPGYLE EEGIPPNSTT
ETYAAMRLGV NTRRWAGVPF YLRTGKRLGR RVTEVALVFH RTANQVFDHV ATANQGANSL
VIRIQPDEGV TLRFGSKVPG TAMEVRDVSM DFSYGASFTE TSPEAYERLI LDVLIGDPPL
FPHQEEVELS WRILDPVEEF WAKNGRPEPY PAGSWGPPSG HELLARDNRT WRRP