Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1963 |
Symbol | |
ID | 3580188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2295508 |
End bp | 2296251 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637685655 |
Product | hypothetical protein |
Protein accession | YP_290019 |
Protein GI | 72162362 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.154391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCACGGG TGACTGAGGC GGTCCATCCC CACGTGCGTG GGGCTCACAG CGCCCTCCTG TTGCTCCTGG TGCTGCTCCT TGGTCCATCC CCACGTGCGT GGGGCTCACG ATCTATGCAT TTCCGCCATC GTCAAGGCCG TCGGTCCATC CCCACGTGCG TGGGGCTCAC CGCCCGACTA GCCAGCGCCC AGTGCCACAG GACGGTCCAT CCCCACGTGC GTGGGGCTCA CCAGCCATCG TCGGCACCGC CGCCCACGCG TGGCGGTCCA TCCCCACGTG CGTGGGGCTC ACTGAGCGCT AGATATCGAG ACATCGCCAA CGAACGGTCC ATCCCCACGT GCGTGGGGCT CACTGGGTCT GCTGGAGAGG AAGCGGCTCG AAGTGCGGTC CATCCCCACG TGCGTGGGGC TCACGGGACT GGGAGGACAT CACCACCAGA AGCGCTGAGG TCCATCCCCA CGTGCGTGGG GCTCACGCCC TGCCCCCTCT GTTGGGGGCA GCTCCCGCTG GTCCATCCCC ACGTGCGTGG GGCTCACGAC CCGATCACCC GGGCGGCGTT CGGCCAGGCC GGTCCATCCC CACGTGCGTG GGGCTCACAG AAGCTGACCT GCAACTTTGC GAGGCGTTAT CTCCTCGTTA CCAAAGGCGT GGACAACTTC CTGGGCATCT CCGCCATCCT CAAGGCCATC GGTCCATCCC CACGTGCGTG GGGCTCATCG GGTACCTCGT CGATCTCGGT GTAG
|
Protein sequence | MARVTEAVHP HVRGAHSALL LLLVLLLGPS PRAWGSRSMH FRHRQGRRSI PTCVGLTARL ASAQCHRTVH PHVRGAHQPS SAPPPTRGGP SPRAWGSLSA RYRDIANERS IPTCVGLTGS AGEEAARSAV HPHVRGAHGT GRTSPPEALR SIPTCVGLTP CPLCWGQLPL VHPHVRGAHD PITRAAFGQA GPSPRAWGSQ KLTCNFARRY LLVTKGVDNF LGISAILKAI GPSPRAWGSS GTSSISV
|
| |