| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1925 |
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| Symbol | |
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| ID | 3580833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2251734 |
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| End bp | 2254484 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685617 |
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| Product | aconitate hydratase |
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| Protein accession | YP_289981 |
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| Protein GI | 72162324 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.128572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGCGA ACAGCTTCGG CAGCCGCGAC ACGCTCCGTG TCGGTGACGA GTCGTACGAA
ATCTTCCGCT TGGATGCCAT CGACGGCGTC CAGCGGCTTC CCTACAGCCT GAAGGTGCTG
CTGGAGAACC TGCTGCGCAC CGAGGACGGC GTGAACGTCA CCGCCGACCA TATTCGCGCG
CTGGCCAACT GGGACTCCAA GGCGCAGCCC AGCCAGGAGA TCCAGTTCAG TCCTGCCCGC
GTGATCATGC AGGACTTCAC CGGCGTGCCC TGCGTGGTCG ACCTGGCCAC CATGCGTGAG
GCAGTCCGGG ACCTGGGCGG CGACCCCACC AAGATCAACC CGCTGGCCCC TGCCGAGCTG
GTCATCGACC ACTCGGTGAT CGTCGACGTG TTCGGGCGCC CCGACGCCTT CGAACGCAAC
GTCGAAATGG AGTACGAGCG CAACCGCGAG CGCTACCAGT TCCTGCGCTG GGGCCAGAAC
GCCTTTGAAG GGTTCAAGGT CGTCCCGCCG GGCACCGGCA TCGTGCACCA GGCCAACATC
GAGCACCTGG CCCGGGTCAC CATGGTCCGC AACGGCCAGG CCTACCCCGA CACCTGTGTG
GGCACCGACT CCCACACCAC CATGCAGAAC GGCCTGGGCA TCCTGGGCTG GGGCGTGGGC
GGTATCGAGG CCGAGGCAGC CATGCTCGGC CAGCCGATCT CCATGCTCAT CCCGCGGGTC
GTCGGCTTCA AGCTCACCGG TGAGCTGCCC CCCGGCACCA CCGCCACCGA CCTCGTGCTC
ACCATCACCG AGATGCTGCG GGAGCACGGC GTCGTCGGCA AGTTCGTCGA GTTCTACGGC
GAGGGCGTGG CCTCGGTGCC GCTGGCCAAC CGCGCCACCA TCGGCAACAT GAGCCCGGAG
TTCGGCTCGA CTGCCGCGAT GTTCCCCATC GACGACGAGA CGATCCGCTA CCTGAAGCTG
ACCGGCCGCA GCGACGAGCA GACCGCCCTC GTCGAGGCCT ACACCAAGGA ACAGGGGCTG
TGGCACGACC CGTCGGTGGA GCCCGAGTAC TCCGAGTACC TGGAGCTCGA CCTCTCCGAG
GTGGTGCCGT CGATCGCCGG ACCCAAGCGC CCGCACGACC GCATCGCCCT GTCCGACGCC
AAGACGGCCT GGCGCCGGGA CGTGCGCGAC CACGTCAACA ACGACGGCAT CGTCACCCGC
GCGGACGAGG CGTCCGCCGA GTCCTTCCCG GCCTCTGACG CGCCGGCGAT CTCCAGCAAC
GGCGTGGTGA CCGAGCGTCC GCGCAAGCCG GTCAAGGTCA CCCTGGGGGA CGGCACCGAA
TTCACCATCG ACCACGGGTC CGTGGTCATC GCGGCCATCA CCTCCTGCAC CAACACCTCC
AACCCGTCGG TCATGCTGGG CGCGGCCCTG CTGGCCAAGA AGGCGGTGGA GAAGGGGCTG
TCCCGCAAGC CGTGGGTGAA GACCTCGCTG GCCCCCGGGT CCAAGGTCGT CACCGACTAC
TACGAGCGTT CCGGCCTGAC CCCGTACCTG GACAAGCTGG GCTTCAACCT CGTCGGCTAC
GGCTGCACCA CCTGCATTGG CAACTCCGGT CCGCTGCCGG AGGAGATCTC CAAGGCGATC
AACGACAACG ACCTCGCGGT CGCCGCGGTG CTGTCCGGTA ACCGCAACTT CGAAGGCCGC
ATCAACCCCG ATGTCAAGAT GAACTACCTG GCCTCCCCGC CGCTGGTGGT GGCCTACGCG
CTGGCCGGGA CGATGGACAT CGACTTCGAC ACCGAGCCGC TGGGCACCGA CACCGACGGC
AACCCGGTCT ACCTGCGCGA CATCTGGCCT TCGCCGGAGG AGATCCAGGA GGTCATCGAC
TCCGCGATCG CCGCGGAGAT GTACCAGCGG GCCTACTCTG ACGTGTTCGC CGGCGACGAG
CGGTGGCGCT CGCTGCCCAC TCCCACCGGG GACACGTTCT CCTGGGACCC GAACTCCACC
TACGTGCGCA AGCCGCCCTA CTTCGACGGC ATGCCGCTGG AGCCCGAACC GGTCAGCGAC
ATTGTCGGCG CCCGCGTGCT GGCCAAGCTC GGCGACTCCG TCACCACCGA CCACATTTCG
CCCGCCGGCG CCATCAAGCC GGGCACCCCG GCCGCTGAAT ACCTCATGGC CAACGGGGTG
GAGCGCAAGG ACTTCAACTC CTACGGGTCG CGTCGCGGCA ACCACGAGGT GATGATCCGC
GGCACCTTCG CCAACATCCG GCTGCGCAAC CAGATCGCAC CGGGCACCGA AGGCGGCTAC
ACGCGCGACT TCACCCAGGA AGGTGGTCCC GTCACCTTCA TCTACGACGC CGCGCAGAAC
TACGCTGCCC AGAACATCCC GCTGGTGGTG CTGGGCGGCA AGGAGTACGG CTCCGGTTCT
TCGCGCGACT GGGCGGCCAA GGGGACCCGC CTGCTGGGCG TGCGCGCCGT CATCGCCGAG
TCTTTCGAGC GCATCCACCG CTCGAACCTG ATCGGCATGG GCGTGCTGCC GCTGCAGTTC
CCCGAAGGCC AGTCCGCGGA CTCTCTCGGC CTGACCGGTG AGGAGACCTT CTCGATCACC
GGCGTGACCG AGCTGAACGA GGGCCGCATC CCCGAGACGG TCAAAGTCAC CACGGACACC
GGGGTCGAGT TCGACGCTGT GGTGCGGATC GACACCCCGG GTGAGGCCGA CTACTACCGC
CACGGCGGCA TCCTGCAGTA CGTGCTGCGC CAGTTGATCA ACAAGAAGTA G
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| Protein sequence | MSANSFGSRD TLRVGDESYE IFRLDAIDGV QRLPYSLKVL LENLLRTEDG VNVTADHIRA
LANWDSKAQP SQEIQFSPAR VIMQDFTGVP CVVDLATMRE AVRDLGGDPT KINPLAPAEL
VIDHSVIVDV FGRPDAFERN VEMEYERNRE RYQFLRWGQN AFEGFKVVPP GTGIVHQANI
EHLARVTMVR NGQAYPDTCV GTDSHTTMQN GLGILGWGVG GIEAEAAMLG QPISMLIPRV
VGFKLTGELP PGTTATDLVL TITEMLREHG VVGKFVEFYG EGVASVPLAN RATIGNMSPE
FGSTAAMFPI DDETIRYLKL TGRSDEQTAL VEAYTKEQGL WHDPSVEPEY SEYLELDLSE
VVPSIAGPKR PHDRIALSDA KTAWRRDVRD HVNNDGIVTR ADEASAESFP ASDAPAISSN
GVVTERPRKP VKVTLGDGTE FTIDHGSVVI AAITSCTNTS NPSVMLGAAL LAKKAVEKGL
SRKPWVKTSL APGSKVVTDY YERSGLTPYL DKLGFNLVGY GCTTCIGNSG PLPEEISKAI
NDNDLAVAAV LSGNRNFEGR INPDVKMNYL ASPPLVVAYA LAGTMDIDFD TEPLGTDTDG
NPVYLRDIWP SPEEIQEVID SAIAAEMYQR AYSDVFAGDE RWRSLPTPTG DTFSWDPNST
YVRKPPYFDG MPLEPEPVSD IVGARVLAKL GDSVTTDHIS PAGAIKPGTP AAEYLMANGV
ERKDFNSYGS RRGNHEVMIR GTFANIRLRN QIAPGTEGGY TRDFTQEGGP VTFIYDAAQN
YAAQNIPLVV LGGKEYGSGS SRDWAAKGTR LLGVRAVIAE SFERIHRSNL IGMGVLPLQF
PEGQSADSLG LTGEETFSIT GVTELNEGRI PETVKVTTDT GVEFDAVVRI DTPGEADYYR
HGGILQYVLR QLINKK
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