Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1885 |
Symbol | |
ID | 3579468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2208619 |
End bp | 2209830 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685577 |
Product | putative integral membrane protein |
Protein accession | YP_289941 |
Protein GI | 72162284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGTCCG GTCATCGGCT GAATTCCGCG GCGCCTGACC CGGCAGCGCG GCGGGCCCGC TGGGGGGTTG CCGGGCTGTT CGCGAGCAAC GGGCTCGGCT ATCCCTCTGT AGTGCCGTGG CTCCCCGAGA TCAAAAACCA GCTTGAGCTG TCCAATACGG CTCTGGGCAC CGCGATCGCT GCCATGCCGC TGGGTGCGCT GCTGACCGGT ATGCTCGCCG GACCGTTCAT CTCCCGGTGG GGCAGCGGCC GTACCGCGGT GGTCTGCGCG CTGGTGTCCA CGTGGCTGCT GCCGGTGATC GCGCTGGCAC CCCAATGGGG GGTGCTGGTG GCCATCCTGT TCGTCATCGG CTGCGTGGAC ACGTGGTGCG ATGCGGCGAT GAACGCTCAC GGGCTGCGGG TACAGCGCCG CTACGGGCGC AGCATTATCA ACACCTTCCA CGCGGTGTGG AGTGTGGCGG CGGTCGCGGG CGGCCTGCTG GGCGCAGCCG CGGTCGGACT GCGGCTGCCT TTCCTGGTCT TCCTCATCGG GCTCGCATGC ATGCTCACCG GACTCGTGGT GGCCTCGTCG CGGCTGCTCT TGGACGGCCC GGAGCACGCC GAACGCAGCG CGGCCTCTCT CGGGGACGGC GCCCGATGGT TTCCGGCTGC GCGAGCAGTG GGGCTGATGG TGGCGCTCGG TGTCCTCCTC ATGCTCGCAG CCGCGGTGGA GGACGCGGCA GCGTCCTGGG GTGCGGTTTA CATGCGGGAC AGCATCGGGG CGACAGCGTT CCTCGCGGGG CTGCCGTTCG TCGCCTGCCA GGCGGCGATG ACCGCGGGGC GACTGGCCGG GGACCGGCTG ACCGATGCGT TCGGGGCGGT GGCGGTGGCA CGGACCGGTC TGCTGCTGTC CGCGGTGGGG TTGAGCGGGG CACTGCTGTT CCCCACCCCG GTGACCACCG TGGTGGGCTT CGGGTTGTGC GGGTTGGGTG TGGCCACCCT GTTCCCGTTG ACGCTGGCCG CTGCGGGCGA GATCCCCGGG GTGCACAGCG GGACCGGTGT GTCTATGGTG GCCTGGCTGG CCCGGCTCGG TTTCCTGGCG TTCCCGCCGC TGGTCGGCCT GGTCGCGGAC GCGACTTCGC TGCGGGTCGG CCTGGCCCTC TTCCCTGTCG CCGCGCTCAT CGGCGCTGCC TTGGCCACCA GTCTCCGGCC CCGCACCTCA GAAGACGGGT GA
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Protein sequence | MLSGHRLNSA APDPAARRAR WGVAGLFASN GLGYPSVVPW LPEIKNQLEL SNTALGTAIA AMPLGALLTG MLAGPFISRW GSGRTAVVCA LVSTWLLPVI ALAPQWGVLV AILFVIGCVD TWCDAAMNAH GLRVQRRYGR SIINTFHAVW SVAAVAGGLL GAAAVGLRLP FLVFLIGLAC MLTGLVVASS RLLLDGPEHA ERSAASLGDG ARWFPAARAV GLMVALGVLL MLAAAVEDAA ASWGAVYMRD SIGATAFLAG LPFVACQAAM TAGRLAGDRL TDAFGAVAVA RTGLLLSAVG LSGALLFPTP VTTVVGFGLC GLGVATLFPL TLAAAGEIPG VHSGTGVSMV AWLARLGFLA FPPLVGLVAD ATSLRVGLAL FPVAALIGAA LATSLRPRTS EDG
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