Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1847 |
Symbol | |
ID | 3579430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2154213 |
End bp | 2154971 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685539 |
Product | peptide ABC transporter ATPase |
Protein accession | YP_289903 |
Protein GI | 72162246 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.838866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTACAC CCCCCGCACC TTCGGGGACC GCGGAGCCCC ACGCTGTTGT CGTCCAAGGA CTGACCAAGG TCTATCCGAC CGGGGGAGAA CCGGTCCGTG CCTTGGACGG GGTGGACGTG TCCTTCGCAC GAGGCGCGTT CACCGCGATC ATGGGGCCCT CCGGTTCCGG GAAATCCACG CTCATGCACT GCATGGCCGG GCTGGACACG CCCACGTCCG GTTCGGTGCG CCTCGGGGCA ACGGAACTGA CCGCTTTGAG CGACAAGCAG CTGACGCTGC TGCGGCGCGA CCGGATCGGT TTCGTCTTCC AGTCGTTCAA CCTGCTGCCG ATGCTCACTG CGCGGCAGAA CATCCTGCTC CCCTCCCAGA TCTCCAAGCG CAAAGTCGAC CCGGAGCGGT TCCGCCACAT CGTGGAGGTC ACCGGCCTCG CCGACCGGTT GGAGCACCTG CCCGCCAAAC TGTCGGGCGG CCAGCAGCAG CGGGTGGCGG TGGCCCGGGC CCTCGTGGGC TCCCCTGAAG TGCTCTACGC CGACGAGCCC ACCGGCAACC TCGACTCCCG TTCCGGCGCG GAAGTGCTGT CCTTCCTCCG CGACTCGGTC CGCGAACTAG GGCAGACCAT CGTGATGGTC ACCCACGACC CGATCGCCGC CTCCTACGCC GACCGGGTGG TGTTCCTGCG GGACGGCCGG GTGGTCGACG ACGTCACCCA CCCCACCCCG CAGCTCATCC TCGACCGGCT CGCTGGACTG GAGGGCTGA
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Protein sequence | MPTPPAPSGT AEPHAVVVQG LTKVYPTGGE PVRALDGVDV SFARGAFTAI MGPSGSGKST LMHCMAGLDT PTSGSVRLGA TELTALSDKQ LTLLRRDRIG FVFQSFNLLP MLTARQNILL PSQISKRKVD PERFRHIVEV TGLADRLEHL PAKLSGGQQQ RVAVARALVG SPEVLYADEP TGNLDSRSGA EVLSFLRDSV RELGQTIVMV THDPIAASYA DRVVFLRDGR VVDDVTHPTP QLILDRLAGL EG
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