| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1765 |
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| Symbol | |
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| ID | 3581171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2062463 |
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| End bp | 2065306 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685459 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_289823 |
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| Protein GI | 72162166 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTT ATGCCGCCCG CTACGCCGAG TTCCGCAGGC GACAAAAGGA GTCCAGCCCC
ACCATCGAGG AGTTCCAGAA TCTCTACGGG TTCGACTTCG ACGACTTCCA GATCCGGGCC
TGCAAAGCCT TGGAGACGGG GCATGGGGTG CTGGTCGCCG CACCCACCGG TTCCGGAAAG
ACCGTCGTGG GAGAGTTCGC TGTCCACCTG GCGCTGCGTG ACGGTCGCAA GTGCTTCTAC
ACCACCCCGA TCAAGGCGCT GTCCAACCAG AAGTACACCG ACCTGGTGCG CCGGTACGGC
TCCGACAAGG TGGGGCTGCT CACCGGGGAC AACAGCATCA ACGGTGAGGC GCCTGTCGTG
GTGATGACCA CCGAGGTGCT GCGCAACATG CTGTACGCGG GCTCCGCCAC ACTGTCGGGC
CTGGCGTACG TGGTCATGGA CGAGGTGCAC TACCTGGCTG ACCGGTTCCG CGGCGCGGTG
TGGGAAGAAG TCATCATTCA CCTGCCCGAA TCCGTGCAGA TCGCGGCGTT GAGCGCCACG
GTCAGCAACG CCGAGGAGTT CGGCCAGTGG CTCCAGCAGG TGCGCGGCGA CACGTCGGTG
ATCGTGGACG AGAAACGCCC CGTGCCGCTG TGGCAGCACA TGATGGTGGG CACCCGCATC
CACGACCTGT TCGTGGAACC GGAGGGCACC GACACCGGGC AGGAAGAGGA GAAGAACGGA
CGCGGCTCCC GGAAACGCCG CCGGTCCCGG CATGCCCGGC AGCGCACCGT GGAGATCGAG
GTCGGCGGGG AACGGCTCCA CGTCAACCCG AAACTCATCC GGTTCGCCGA AGAGGACGCC
CGCCTCACCC AACTGGCCTA CCAGCGCCGC CACCCGCAGG CGCGGGCCCG CGGCGGTGCT
CCCCGGCCGC GGAGCAGGTT CGCGCCGCCC ACTCGGGCAC AGATCGTCGA ACAGCTCGAC
CGCGAAGGCC TGCTGCCCGC CATCACGTTC ATCTTCAGCC GGGCGGGCTG CGATGAGGCG
GTGCGCCAGT GCGTGGCCAG CGGGCTGGTG CTGACCACCC CGGAGGAAGC AGCAGAGATC
CGCGAGTACG CGGAACGGCA GTGCGCCGAG ATCCCTCCGG CGGATCTCAA CGTGCTCGGC
TACTCCGAGT GGCTGCAGGC ATTGGAGTGC GGGATCGCCG CCCACCACGC CGGGATGCTG
CCCACCTTCA AAGAAGTGGT GGAAGTGTTG TTCTCCCGCG GCCTGATCCG CGCCGTGTTC
GCCACGGAGA CACTGGCGCT GGGCATCAAC ATGCCCGCCC GCACTGTCGT CATCGAAAAG
CTCGACAAGT GGAACGGGGA GACGCACGTC GCCCTCACCC CTGGCGAGTA CACCCAGCTC
ACCGGCCGTG CGGGACGCCG GGGCATCGAC GTGGAGGGGC ATGCGGTCGT GGTGTGGCAG
CCAGGCACCG ACCCGGAGAT GGTCGCCGGG CTGGCGGGCA CCCGCACCTA TCCGCTCAAC
TCCAGCTTCC AGCCGTCCTA CAACATGGCG GTCAACCTGG TCGCGCAGGT CGGTCGGGAA
CGCGGCCGGG CCATGCTGGA GTCCTCCTTC GCCCAATTCC AGGCGGACCG TTCCGTGGTG
GGTCTGGTGC GGAAGCTCCG CGCCCAGCAG GAGGCGCTGG AAGGCTACGC CAAAGCCGCC
TACGACCCGC GCGGCGACTT CATGGAGTAC GCGGCGATGC GCCGCCGGCT CTCCGACTTG
GAGAGCGCCG CGCAACGCAA CCGGCGCACG GCACGCCGCA AGGAAGCGGA ACGCAGCCTG
CGTGCGCTCC GCACCGGCGA CATCATCCGT ATCCCGTCGG GACGCCACGC CGGCTACGCC
GTCGTGCTGG ACCCGGGGCT GGACAAGGGC CCGCTGCCTG TCCCGCTCGT GCTGACCGTG
AACCGCCAGG TGAAACGGGT CAGCGCCAAC GACTTCCCGA TCCCGGTGGA GCCGACAGGG
CGGCTGCGGA TACCGAAGTC GTTCTCTGCG CGTTCCGCGC AGGCGCGCCG CGACCTGGCG
TCAGCGCTCC GCAGCAAACT GGAGACTCTT CCCACGGCTC CGATCCGGCA CCGGGTGCGC
GACGGGGCCC CAGAGGACCC GGAGATCGCG GAGTTGCGTG CTCGCATCCG AGAGCACCCT
TGCCACCACA GCGAAGGCCG GGAGGACCGG GCCCGCTGGG CGGAACGCTA CTTCCGGTTG
AAGAAGGAGA CCGAGGAACT GGAGCGCCGT ATCGAAAGCC GCTCCCACGT CATCGCCCGC
ACGTTCGACC GGGTCTGCGG AGTGCTGCAG GAACTGGACT ACTTGGAGGG CGACACCGTC
ACCGAGGACG GGCGGCTGCT CAGCCGCATC TACTCGGAGC TGGACCTGCT GGCAGCCGAG
TCGCTGCGGC GCGGCGTGTG GGATGCGCTG GGGCCGGAGG AGCTGGCCGC CTGCGTGTCC
GCGCTGGTGT ACGAGTCGCG GCGGCCTGAC GAGGTGTTCG CCCGCGTGCC GTCCGGCCCT
GTCGAGGAGG CGCTGAACGC CATGATGCGG CTGTGGGGCG AGCTGAGCGA TATCGAACAC
CGGCACCGCG TGTCCTTCCT GCGGGAACCG GATCTGGGCT TCGTCTGGCC CACCTACCGG
TGGGCGCGCG GCGACCAGTT GGATCACATC CTCAACGAGG CGGGGATGCC GGCGGGCGAC
TTCGTACGCT CCACGAAGCA GCTCATCGAC CTGCTGGGGC AGATCGCCCA GGCCGTGCCG
GAGGCCAGCG GGGTGCGCAC CACGGCGCGG CAGGCCGCCG ACAAGCTGAT GCGCGGCGTG
GTCGCCTACA CCTCGGTGGG CTGA
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| Protein sequence | MSTYAARYAE FRRRQKESSP TIEEFQNLYG FDFDDFQIRA CKALETGHGV LVAAPTGSGK
TVVGEFAVHL ALRDGRKCFY TTPIKALSNQ KYTDLVRRYG SDKVGLLTGD NSINGEAPVV
VMTTEVLRNM LYAGSATLSG LAYVVMDEVH YLADRFRGAV WEEVIIHLPE SVQIAALSAT
VSNAEEFGQW LQQVRGDTSV IVDEKRPVPL WQHMMVGTRI HDLFVEPEGT DTGQEEEKNG
RGSRKRRRSR HARQRTVEIE VGGERLHVNP KLIRFAEEDA RLTQLAYQRR HPQARARGGA
PRPRSRFAPP TRAQIVEQLD REGLLPAITF IFSRAGCDEA VRQCVASGLV LTTPEEAAEI
REYAERQCAE IPPADLNVLG YSEWLQALEC GIAAHHAGML PTFKEVVEVL FSRGLIRAVF
ATETLALGIN MPARTVVIEK LDKWNGETHV ALTPGEYTQL TGRAGRRGID VEGHAVVVWQ
PGTDPEMVAG LAGTRTYPLN SSFQPSYNMA VNLVAQVGRE RGRAMLESSF AQFQADRSVV
GLVRKLRAQQ EALEGYAKAA YDPRGDFMEY AAMRRRLSDL ESAAQRNRRT ARRKEAERSL
RALRTGDIIR IPSGRHAGYA VVLDPGLDKG PLPVPLVLTV NRQVKRVSAN DFPIPVEPTG
RLRIPKSFSA RSAQARRDLA SALRSKLETL PTAPIRHRVR DGAPEDPEIA ELRARIREHP
CHHSEGREDR ARWAERYFRL KKETEELERR IESRSHVIAR TFDRVCGVLQ ELDYLEGDTV
TEDGRLLSRI YSELDLLAAE SLRRGVWDAL GPEELAACVS ALVYESRRPD EVFARVPSGP
VEEALNAMMR LWGELSDIEH RHRVSFLREP DLGFVWPTYR WARGDQLDHI LNEAGMPAGD
FVRSTKQLID LLGQIAQAVP EASGVRTTAR QAADKLMRGV VAYTSVG
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