| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1718 |
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| Symbol | |
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| ID | 3581657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1999482 |
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| End bp | 2000387 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685412 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_289776 |
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| Protein GI | 72162119 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCA ACGGAATCCT GTTCTTCCCG CTGACCCCCT TCGACGAGCG GGGAGACGTC
AACGAGGCCG CGTTCGAACA GCACGTGGCT TCTGGACTCG ACCATGGGGC GGGCGGCGTT
TTCGCGGCCT GCGGCACGGG TGAGATCCAC GCCCTGTCCG CTGAGGAGCA CGCCCGCGTC
GTGCGCCGCG CCGTCGCGGT GACCGCGGGA CGGGTCCCCG TGATCGCGGG CGCCGGGGGC
AGTGTGAGCA CCGCGATCGA GCAGGCCACC GCGGCCCGGG AACTGGGCGC GGACGGGGTC
CTGCTGCTCC CGCCCTACCT GGTGCACGCC CCCCAGCGCG GCCTGGTGGA ATACGTGCGC
GCAGTAACCT CCGCCGTGGA CATTCCGGTC ATCGTCTACC AGCGGGGCAC CATGGTGTTC
ACCCCGGACA GCGCGGCCGA GCTCGCGGAG ATCCCCACAG TGGTGGGGTT CAAAGACGGG
GTGGGCGACG TGGGCACCAT GCGCCAGATC GTGCTGACCG TCCGGCAGCG GCGCGGCGAC
AACTTTGTTT TCTTCAACGG CCTGCCCACC GCCGAACTGA CCTTCCACGC CTACCAGGGG
ATCGGGGTGC CGCTGTACTC TTCGGCGGCG TTCGCGTTCG TGCCCGAGGT TGCCACCGCG
TTCTACCGGG CCGCCCACGC GGGCGAGGAA CTCGCCGACC GCCTGCTCCG CGACTTCTAC
GACCCGTTGG TGCGGTTGCG GGACCGCGTC CCCGGATACG CGGTCTCCTT GATCAAGGCG
GGGGCGCGGC TGCGTGGCGC GGACGTGGGC GGGGTGCGGC CGCCGTTCGT CGACCCGAGT
GAAGAGCACC TCGCGGAACT GCGCACGATC ATCGACACCG GCCTGGCATT GCTCAAGGAG
CAGTGA
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| Protein sequence | MDFNGILFFP LTPFDERGDV NEAAFEQHVA SGLDHGAGGV FAACGTGEIH ALSAEEHARV
VRRAVAVTAG RVPVIAGAGG SVSTAIEQAT AARELGADGV LLLPPYLVHA PQRGLVEYVR
AVTSAVDIPV IVYQRGTMVF TPDSAAELAE IPTVVGFKDG VGDVGTMRQI VLTVRQRRGD
NFVFFNGLPT AELTFHAYQG IGVPLYSSAA FAFVPEVATA FYRAAHAGEE LADRLLRDFY
DPLVRLRDRV PGYAVSLIKA GARLRGADVG GVRPPFVDPS EEHLAELRTI IDTGLALLKE
Q
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