| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1690 |
|---|
| Symbol | |
|---|
| ID | 3580871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1964676 |
|---|
| End bp | 1965767 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637685384 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_289748 |
|---|
| Protein GI | 72162091 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.525847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCA GACGCGACTT CCTGCGGTAC ACCACGGCCG TCGGAGCAGC CCTCCCCCTG
CTGGCCGCGT GCGGCCCTTC GCGCGGCTCA GACGGCACCG GGGAGGCCAC TGTCCTGCGC
TACCAGGGCA CTACGGGGTC CGTCACCCTC CCCGAACTCG CTGCCGACCT CGGCTACCTC
GACGGCATCG ACCTGGAATG GCTCAGCGAC ACCACCAGCG GCCCCCAGTC CATCCAGGCC
GCCGCCACCG GCGACACCGA CTACGGGGGA GCCTTCAACG GGGCGATCCT CAAACTCGTC
GCCGCCGGGT CCCCGGTCAC CGCCGTCATC GCCTACTACG GCTCCGACGA GGAGACGTAC
AGCGGCTACT ACGTGCTCGA GGACAGTCCC CTCACCCAGC CGCGCGACCT GATCGGCGCC
ACCGTCTCCA TGAACACCCT CGGTGCCCAT CACGAGTTCG TGGTCCGCGA ATGGCTGTCC
CGCAACGGAC TGACCGAGGA GGAGATCGCC CAGGTCGAAC TGACCGTCGT CCCCCCGGTC
AACGCCGAGC AGTCGCTCCG CAGCGGCCAA GTGGACGTCG CCACCCTCAG CGGCATCCAT
CGGGAAAAAG CCTTGGAGCG CGGCGGACTG CGCCCCCTGT TCACCGATAC CGACCTCTAT
GCGTTCAGCT ACGGCAGCCT CGTGCTCCGC AACGACTTCA TCGAACGCCA CCCCACCACC
ACCCGCGCGT TCGTCGAAGG GGTGGCCCGC GCCATCCGCT GGGCCCAGAC CAGGCCCCGC
GAGGAGGTTG TCGACCGGTT CGTCTCCATC ATCGAACGCC GCGGCCGCAA CGAAGACACC
GAGACCATCC AGTACTGGAA GAGCGACGGC GTCGCAGGCC CCGGCGGGGT GATCGCCGAC
AAGGAGTTCT CGGTCTGGCA CGACTGGCTG GTGCGCAACG GGGAGCTCGC TGAGGGCCGC
ATCTCCCTCT CCGAGGTGTA CACCAACGAG TTCAACCCCT ATGCCAACGG CACCTACCCG
CCCGACTCCG GGCCTGACGG CGAACCGATC GCCGCCACCG CCGGCGGCGG AACCACGGGA
GAAGGCCAAT GA
|
|---|
| Protein sequence | MHTRRDFLRY TTAVGAALPL LAACGPSRGS DGTGEATVLR YQGTTGSVTL PELAADLGYL
DGIDLEWLSD TTSGPQSIQA AATGDTDYGG AFNGAILKLV AAGSPVTAVI AYYGSDEETY
SGYYVLEDSP LTQPRDLIGA TVSMNTLGAH HEFVVREWLS RNGLTEEEIA QVELTVVPPV
NAEQSLRSGQ VDVATLSGIH REKALERGGL RPLFTDTDLY AFSYGSLVLR NDFIERHPTT
TRAFVEGVAR AIRWAQTRPR EEVVDRFVSI IERRGRNEDT ETIQYWKSDG VAGPGGVIAD
KEFSVWHDWL VRNGELAEGR ISLSEVYTNE FNPYANGTYP PDSGPDGEPI AATAGGGTTG
EGQ
|
|---|
| |