Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1661 |
Symbol | |
ID | 3581281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1932578 |
End bp | 1933489 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637685355 |
Product | putative ABC transporter membrane protein |
Protein accession | YP_289719 |
Protein GI | 72162062 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.726587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCA TCGACTGGCT GACCGTCCCC TTCACGTTCG AGTTCATGCA GCGGGCACTC CTGGCTAGCG TGCTCGCGGG CGCAGTGTGC GCGGTGCTGT CCTGCTGGGT GACCTTGATC GGCTGGTCGC TGATGGGGGA CGCCATCTCG CATGCGGTCC TGCCCGGCGT AGTGCTGTCC TACCTGCTCG GGCTGCCGTT CGCGGTGGGA GCACTGGTCT TCGGCGTAGG CTCGGTGGCG CTGATCGGCA CAGTCAACCG CACGTCCCGC GTCAAAGAGG ACGCCGCGAT CGGCATCGTG TTCACCGCGA TGTTCGCGCT CGGCGTGGTC ATCATCTCCC GCATCTCCAG CGACACCGAC CTGCGACACA TCCTCTTCGG TAACCCGCTC GGCGTCAGCG ACGTCGAGAT CCTGCAGATC GTGGTGATGA CCGTCGTCAC GCTGGCCGTG GTGGCGTTCA CCCACCGCGA CTTGACCTTG TACGCTTTCG ACCCGGCCCA CGCGCACGTG ATCGGGCTGC GGCCGCGCCG CCTGGAAGCA CTGCTGCTCG GGCTGCTGGC GGTGACCGTG GTCATCGCAC TCCAGGTGCT CGGCATCATC ATGGTCGTCG CCATGCTGAT CATCCCGGGC GCGACCGCCT ACCTGCTCAC GGACCGCTTC GAACGGATGA TGCTCATCGC GGTGGCCACG TCAGTGGCTG CCTCGGTGGT GGGGGTCTAC GCCAGTTTCC TGCTGGATGT GGCGCCCGGC GGCATGATCG TCCTCGTGCA GGCGCTGCTC TTCGCTGCCG CCTATCTGCT GGCACCCCGC TACGGCTTGC TCGCCCGCCG GGCAGGGGCA CGGAGAGCAG CCGTCCTGGA CACCGCCGAG GCGGCCCAGG GGACCGCTTC CGCAGAGCGG GTCCAGGGAT AG
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Protein sequence | MTLIDWLTVP FTFEFMQRAL LASVLAGAVC AVLSCWVTLI GWSLMGDAIS HAVLPGVVLS YLLGLPFAVG ALVFGVGSVA LIGTVNRTSR VKEDAAIGIV FTAMFALGVV IISRISSDTD LRHILFGNPL GVSDVEILQI VVMTVVTLAV VAFTHRDLTL YAFDPAHAHV IGLRPRRLEA LLLGLLAVTV VIALQVLGII MVVAMLIIPG ATAYLLTDRF ERMMLIAVAT SVAASVVGVY ASFLLDVAPG GMIVLVQALL FAAAYLLAPR YGLLARRAGA RRAAVLDTAE AAQGTASAER VQG
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