Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1641 |
Symbol | |
ID | 3580477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1907932 |
End bp | 1909254 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685335 |
Product | valine-pyruvate aminotransferase |
Protein accession | YP_289699 |
Protein GI | 72162042 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.320192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGTTG ATCCCCGAGA GTCCCAACCC AACCCGCAGG GTTCACGTAT CGACCCCTAC GTCGACGCTT ACGCGGCACG CGCCGCAGGG ATGGTGGCCT CGGAAGTCCG CGCACTGTTC GCCGTCGCTT CCCGACCCGA AGTGGTCTCC CTCGCCGGGG GAATGCCCAA CATCAGCGCC CTGCCGCTGG ACGCTCTCGG GGAACTCGCT CAGCAGGTCG TCGTCGAACA GGGCCGCACC GCCCTGCAGT ACGGCTCAGC CCAAGGCGAC CCGGTGCTGC GCCAGCAGAT CTGCGAGGTT ATGGCCCTCG AGGAGATCGA CGCCAGTCCG GACGACGTGA TCGTCACCGT CGGTTCCCAG CAGGCACTGG ACCTCGTCAC CAAAGTCTTC GTCGACCCCG GCGACGTGGT GCTGACCGAG GGGCCCACGT ACGTGACCGC GATCAACACC TTCGCCGCCT ACCAGGCCCA CATCGAACAC ATCCCCATGG ACGACGACGG GGTCATCCCC GAAGCGCTCG AGGAACGTCT CGCCGCCCTG ACCCGTCAAG GAAAACGGGT CAAGTTCTTC TACACGGTGC CGACCTTCAA TAACCCTGCC GGGGTCACCC TGGCCCCGGA GCGGCGCCAC CGCGTCCTGG AGATCTGCGA GCGGTTCAAC CTGCTGGTCG TCGAAGACAA CCCGTACGGC CTGCTGCGGT ATGAAGGCGA TCCGGTGCGT CCGCTCCGCG CCGAGTCGGA ACGCAACGTC ATCTACCTGG GGTCTTTTTC GAAGACGCTG TCCCCCGGGT TCCGGATCGG CTGGGCGCTG GCTCCGGCAG CGGTGCGTGA CAAGCTCATC TTGGCCGTCG AGTCGGCGAT GCTCAGCCAC TCCAACTTCA ACCAGGCGAT TGTGGGCCGC TACCTGGCCA CCCAGCCGTG GCCGGAACAG ATCAAAGAGT TCAACGAAAT GTACCGGGCC CGCCGCGACG CCATGCTGTC GAGCCTGGAC GCGCTCATGC CGCCGGAATG CTCGTGGACC CGGCCCAGCG GCGGCTTCTT CGTGTGGGCG ACCCTCCCCG AAGGGATCAA TTCCAAGGCG ATGCTGCCCC GCGCCGTCAA CGAACGGGTC GCCTACGTTC CGGGAACCGG CTTCTACTAC GGTGGCGGCG GAGAACGCAA CATGCGGTTG TCGTTCTGCT ATCCCACTCC CGAACAGATC CGCGAGGGAG TGCGCCGCCT GGTGAGTGTC CTGGAGAGCG AGATCGAGCT GCGTGACACC TTCGGTGGTG TCCCCTCCTC CACCGGGCGG GGCGGCGAGG CGCCAGCGCC TGACCTGCCG TAG
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Protein sequence | MSVDPRESQP NPQGSRIDPY VDAYAARAAG MVASEVRALF AVASRPEVVS LAGGMPNISA LPLDALGELA QQVVVEQGRT ALQYGSAQGD PVLRQQICEV MALEEIDASP DDVIVTVGSQ QALDLVTKVF VDPGDVVLTE GPTYVTAINT FAAYQAHIEH IPMDDDGVIP EALEERLAAL TRQGKRVKFF YTVPTFNNPA GVTLAPERRH RVLEICERFN LLVVEDNPYG LLRYEGDPVR PLRAESERNV IYLGSFSKTL SPGFRIGWAL APAAVRDKLI LAVESAMLSH SNFNQAIVGR YLATQPWPEQ IKEFNEMYRA RRDAMLSSLD ALMPPECSWT RPSGGFFVWA TLPEGINSKA MLPRAVNERV AYVPGTGFYY GGGGERNMRL SFCYPTPEQI REGVRRLVSV LESEIELRDT FGGVPSSTGR GGEAPAPDLP
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