| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1474 |
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| Symbol | |
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| ID | 3579486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1704287 |
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| End bp | 1705075 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685169 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_289533 |
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| Protein GI | 72161876 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0346872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGACCG ACAAAAGAGT CCTCGTCACC GGGGCTGGCG GCGGGATCGG GCGGGAGATC
GCGGTGGAAG CGGCCCGGCA GGGCGCGGCC TGGGTGACTG TTGCGGACCT CAACCCGGCC
GCGGCCGCTG AGACCGCGGA AATGGTTGCA GGGGTCGGGG CGCGCGCTCA CGCGGTCGCC
GTTGACCTGG CGGATTCCGC TCAGGTGCGG CGCATGGTGG AGGAGGCTGT GGCTGCGGGA
GGCGGGCTGG ACACACTCGT CAACAACGCT GGCGTGCTGG ACTCGGCTTT CACCGACACC
CCCACGGTGG AGGAGCTGCC GGAGGAGGCA TGGGACCGGG TTTATGCCGT CAACGTCAAA
GCGGTCTGGC TGGCCACCAA GTTCGCGGCA CCCCATTTGC GGGCCTCGGA GCGCGGCCCG
TCTGTGGTGA ACGCGGCGTC GGTAGCGGGG ATGACCGGCT ACGGTTCCCC GGCCTACGCG
TCGAGCAAGG GCGCGGTCAT CCAGCTCACC CGTTCCATGG CGATTGCGCT CTCACCGCAG
GTGCGCTGCA ACGCCTACTG CCCCGGGTCG ATTGAGACTC CGATGAGCCG GGCGCACCTG
GAGGCGAGCG AGGACCGGGA AGCGCGGCTG CGCTCCATGA TCGGCGCGCA TTTGATCCCC
CGTTTCGGCA GGCCCAGCGA GGTCGCCAAA GTGGTGTGCT TCCTCGCGTC CGACGATGCT
TCCTTCGTCA CCGGCGGGAT TTTTCCCGTG GACGGGGGGA CAACTGCCTG GCGCGGGCTT
CGAGAGTAG
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| Protein sequence | MLTDKRVLVT GAGGGIGREI AVEAARQGAA WVTVADLNPA AAAETAEMVA GVGARAHAVA
VDLADSAQVR RMVEEAVAAG GGLDTLVNNA GVLDSAFTDT PTVEELPEEA WDRVYAVNVK
AVWLATKFAA PHLRASERGP SVVNAASVAG MTGYGSPAYA SSKGAVIQLT RSMAIALSPQ
VRCNAYCPGS IETPMSRAHL EASEDREARL RSMIGAHLIP RFGRPSEVAK VVCFLASDDA
SFVTGGIFPV DGGTTAWRGL RE
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