| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1407 |
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| Symbol | |
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| ID | 3580958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1629511 |
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| End bp | 1630827 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685104 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_289468 |
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| Protein GI | 72161811 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.723356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCA CTGCCCAAGC CGCCTCTCCC GTAACGGCGG AGATCGAGGC CGCCTCGGCG
ACGCTTGATG AGCTGATCGC ACGGGGACGC GCCCGGGGAC ACGTGTCTCT CTCCGAGCTG
CGTACTGCGT TCTCCGAGGC CGGGATCACC CCTGCCGAAG GCCGTTCTCT TCTCCGGGAG
CTGTCCGACA CCGGAGTCCG GATCGCCAAC AACGAGGATA CTCCGGTGGA CCCCGGTGAC
GACGACACGC TGGAAGCTGT TCTGGAGACG ACTTCGAAGG GGAGCGGTCG ACGCCGTTCT
GCCAAGAAAA GAAGCCGGAA GAAGCAGCCA GCCCAGGCCG GGGCGGAGAC TACTGACGCC
CCCGAGGCCG ATCTTGACGA CCATTCACCG GCTCTGGGCG ACTCTGTCCA TACCTACCTC
AAGGCTATCG GACGCCGGGA ACTGCTCACC GCGGAGCAGG AGGTCGAGCT CGCCAAGCGA
ATCGAGGCTG GCCTGTACGC CGAATACAAG CTGGGGTGGC TGGAGGAGTC TCCCGGCCCC
CAGGAGATGA GCGAGACCGA ACGCGAAGAG CTGGAGTGGA TCGCTGAGGA CGGCCGCCGC
GCCAAGGCGC ACATGCTGGA AGCGAACCTG CGCCTGGTGG TGTCGGTGGC GAAAAAGTAC
AGCGACCGCG GCATGCCCCT GCTTGACGTG GTGCAGGAAG GCAACCTCGG GCTGATCCGC
GCCGTGGAGA AGTTCGACTA CGCCAAGGGC TACAAGTTCT CCACCTACGC CATGTGGTGG
ATCCGCCAGG CGATTCAGCG CGGTTTCGCG GACTCGGCGC GGACGATCCG GCTGCCGGTC
CACGTGCTGG AGCTGCTGAG CAAGCTCAGC CGTCTGGAGC GCGATATGCA CCAGACGCTG
GGCCGCGAAC CCACCCCCGA CGAGCTGGCC CAGGAGCTCG GGAAGACCCC GGCGCAGATC
GAAGAGCTGC TGCGGATCAC CCGCCAGCCG ATCAGTCTCG ACTCGACGAT CGGCGAAGAC
GGGGAGACCC GGATCGGCGA CCTCATCGAG GACGTGGACG CGTCCGAGGC GTCCGAGGTG
GTGGACCGCC AGTTGATGGC CGACCAACTG CGTCGCGCGC TCGACGACCT GGAGCCCCGT
GAAGCGACCA TCATGTCGCT GCGGTTCGGC CTATTTGACG GGCGTCCGCG CACCCTGGAC
GAGATCGGCA AGCACCTGGG CCTGACCCGG GAGCGGATCC GACAGTTGGA GAAGCAGTCC
CTGTCCAAGC TGCGGCATCC CAGCCGCGCC CGGCAACTGC TGGACTTCGC TAGCTGA
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| Protein sequence | MSRTAQAASP VTAEIEAASA TLDELIARGR ARGHVSLSEL RTAFSEAGIT PAEGRSLLRE
LSDTGVRIAN NEDTPVDPGD DDTLEAVLET TSKGSGRRRS AKKRSRKKQP AQAGAETTDA
PEADLDDHSP ALGDSVHTYL KAIGRRELLT AEQEVELAKR IEAGLYAEYK LGWLEESPGP
QEMSETEREE LEWIAEDGRR AKAHMLEANL RLVVSVAKKY SDRGMPLLDV VQEGNLGLIR
AVEKFDYAKG YKFSTYAMWW IRQAIQRGFA DSARTIRLPV HVLELLSKLS RLERDMHQTL
GREPTPDELA QELGKTPAQI EELLRITRQP ISLDSTIGED GETRIGDLIE DVDASEASEV
VDRQLMADQL RRALDDLEPR EATIMSLRFG LFDGRPRTLD EIGKHLGLTR ERIRQLEKQS
LSKLRHPSRA RQLLDFAS
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