Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1400 |
Symbol | |
ID | 3581027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1624280 |
End bp | 1624975 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685097 |
Product | endonuclease V |
Protein accession | YP_289461 |
Protein GI | 72161804 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCACA TCACCCCGGA GTTGGCGGCC ATGGAACTGT GGCCTACCGA CCCTGATGCG GCACGTGCCC TCCAAAGCCG GTTGGCGTCC CGGGTACGTG TCCACCCCTG CGACCCGGAT GCGGTGCGCC TGGTCGCAGG CCTGGATGTG AGCTACGGTC CGACCGAGCT GGTGGCGGCC GCGGTCGTCG TGGACGCCGC CACGTTGGAG GTCACCGCCC AGGCCACGGT GCGCGCAACG CCGACGTTCC CGTATGTGCC GGGCCTGTTC GCGTTCCGGG AACTGCCGCC GCTGCTCGCC GCACTGGAAC AGTTGCCTGT CGAACCGGAC GTGTACCTCT GCGACGGTTA CGGGCTGGCG CATCCGCGCC GGTTCGGGCT GGCCTGCCAT CTGGGGGTTT TGGTGGACCG GCCGGTGTTC GGGGTGGCGA AGACCGCGTT TGTGGGTGAC GCCGCCGAAC CCGGCCCGCG GCGGGGCTCA GCCACCGACC TGGTGGACCG CGGTGAAGTG GTGGGCCGCT GCCTGCGGGT CCACGACGGG GTCAAACCGG TGTACGTGTC GGTGGGGCAC CGGGTGGACT TGGATTCCGC GTGCGAGCTG GTGCTACGGC TGTCGCCGCG CTACCGGATC TGTGAGCCGA TCCGCCGCGC CGACCAGTTG TCGCGCCGGG AACTGGCCGC ATCCGGCCGC GCGTGA
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Protein sequence | MPHITPELAA MELWPTDPDA ARALQSRLAS RVRVHPCDPD AVRLVAGLDV SYGPTELVAA AVVVDAATLE VTAQATVRAT PTFPYVPGLF AFRELPPLLA ALEQLPVEPD VYLCDGYGLA HPRRFGLACH LGVLVDRPVF GVAKTAFVGD AAEPGPRRGS ATDLVDRGEV VGRCLRVHDG VKPVYVSVGH RVDLDSACEL VLRLSPRYRI CEPIRRADQL SRRELAASGR A
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