| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1376 |
|---|
| Symbol | |
|---|
| ID | 3581955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1594275 |
|---|
| End bp | 1595588 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289437 |
|---|
| Protein GI | 72161780 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAGCG GCTCACTGAC ATCCCGGTCT TCCCCGGCGT CCGTCCCGCC CCCGCTTTCG
TGGCTGGGGC GCGGGTGGGA CGGACGTCCA CCCGCCGGTC TCGCGGCTTC CGTGTCACCC
GCGAGACCGG CCCGGCAGAA GACCGGTGGT CAGCGGCTCA CTGACATCCC GGTCTTCCCC
GGCGTCCGTC CCGCCCCCGC TTTCGTGGCT GGGGCGCGGG TGGGACGGAC GTCCACCCGC
CGGTCTCGCG GTTCCCGTGT CACCCGCGAG ACCGGCCTCC TCCCCGGGGC ATCCCCCTGG
ATGAAGACCG GTGGTCAGCG GCTCACTGAC ATCCCGGTCT TCCCCGGCGT CCGTCCCGCC
CCCGCTTTCG TGGCTGGGGC GCGGGTGGGA CGGACGTCCA CCCGCCGGTC TCGCGGTTCC
CGTGTCACCC GCGAGACCGG CCTCCTTTTT CTGCCGGTGG GCGGGTGGTG TCGGGACACT
GGCAGAATTT CGACCATGGC CGAACCGACG CTGGACCCGG CTGGCAGTGG TGCTGCTGGT
CGGACTTCTC CTGGTGTGCT GACCCGCCGG ATGCTCGGGG TGGAGGTCTG GTGTGTGTTA
GCGCTGTCGT TGGGTGCGTC GGCTGTGGCC GCGACGATTT CTTTTGTGGG TGCGCTGACT
GCGCCTGAAG CGCTGTCGGA GCAGACGGCG AGCCTGGTGA CGTCAGCGGC GGATGCGGAG
CGTCCGTGGC TGGACTTGTC GTGGCAGGCC TACCGGCTGC TGTTCGCGTT CGCTCCGGTG
GCGTTGGTGG TCTACCTGCT GCACCGGTCG GGGGATTCTG CGCGGACGAT CGGTTTTGAT
CTGCGCCGTC CCGGTTTCGA CGCGGGGTGG GGGGTGCTGC TGGCCGCGGG GATCGGCTTG
GGCGGTCTGG TGGTCTACCT GGTGTCGGTG CAGTGGGGGA TCAATCGTCC TATCGCGCCG
AGTGCGTTGC ACGGGCATTG GTGGCAGCAC GCGGTCCTGG TGTTGCAAGC GGTGAAGAAC
GGCGTGCTGG AAGAGGTTGT GGTGGTCGGC TATCTGCTGC TGCGGTTGGA GCAGTTGGGC
TGGTCGCCGG TGCGGGCGGT GGCGGCGTCG TCGGGGCTGC GTGCGCTCTA CCACCTCTAC
CAGGGGGTGG GCATGTTTGT CGGCAACCTG GTGATGGGGG TGGTGTTCTG CTGGTTCTAC
CGCCGGTACG GGCGGGTGAT GCCGCTGGTG GTGGCACATT CGGTGATCGA CATTGTGGCG
TTTGTGGGGT CGGTGTATGT CATCGGCCGG GTGGGCTGGC TGCCGGGGGC GTGA
|
|---|
| Protein sequence | MVSGSLTSRS SPASVPPPLS WLGRGWDGRP PAGLAASVSP ARPARQKTGG QRLTDIPVFP
GVRPAPAFVA GARVGRTSTR RSRGSRVTRE TGLLPGASPW MKTGGQRLTD IPVFPGVRPA
PAFVAGARVG RTSTRRSRGS RVTRETGLLF LPVGGWCRDT GRISTMAEPT LDPAGSGAAG
RTSPGVLTRR MLGVEVWCVL ALSLGASAVA ATISFVGALT APEALSEQTA SLVTSAADAE
RPWLDLSWQA YRLLFAFAPV ALVVYLLHRS GDSARTIGFD LRRPGFDAGW GVLLAAGIGL
GGLVVYLVSV QWGINRPIAP SALHGHWWQH AVLVLQAVKN GVLEEVVVVG YLLLRLEQLG
WSPVRAVAAS SGLRALYHLY QGVGMFVGNL VMGVVFCWFY RRYGRVMPLV VAHSVIDIVA
FVGSVYVIGR VGWLPGA
|
|---|
| |