Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1330 |
Symbol | |
ID | 3579302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1541032 |
End bp | 1541691 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637685027 |
Product | response regulator receiver |
Protein accession | YP_289391 |
Protein GI | 72161734 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACGCA TCCTGATCGT CGAAGATGAA GACCGCATCG CCTCGTTCGT CCGCAAAGGG TTGAACGCGA ACGGGTTCAC CAGCACCGTG GTGGACCGCG CGGGCGCCGC CATCGACTAT GCGCTCACCG GCAATTTCGA CCTCATGGTT CTTGACCTGG GCCTGCCGGA CGCTGACGGG TTCACGGTGC TGCGCCGGCT GCGTGAGGAA GGCAGCCGGC TGCCGATCAT CATCCTCACT GCTCGCGACA GTGTGCGGGA CACGGTGACC GGTCTGGAAA CCGGTGCCGA CGACTACATG ACTAAACCGT TCCGCTTCGA AGAACTCCTT GCCCGTATCC GGTTGCGTAT GCGGAGCGCG CACAACGCGG AAACAACCGT GCTCCACGCC GGTGACCTCG CCCTTGATCT GCGCACCCGC CGCGCCTCCA CCCCTGAGGC CACTGTCGAC TTGACGGCCC GCGAGTTCGC CCTGTTGGAA CTGTTCCTCC GCCACCCAGG CCAGGTGCTG TCCCGCCAGC AGATTCTCTC CCACGTGTGG GGCTACGACT ACGACCCCGG CTCCAACGTG GTCGACGTGT TCATCCGCGC GTTGCGGAAG AAGATCGGCG CCCACCGGAT CGAAACCCTC CGCGGCATGG GATACCGGCT TGGCGGTTGA
|
Protein sequence | MARILIVEDE DRIASFVRKG LNANGFTSTV VDRAGAAIDY ALTGNFDLMV LDLGLPDADG FTVLRRLREE GSRLPIIILT ARDSVRDTVT GLETGADDYM TKPFRFEELL ARIRLRMRSA HNAETTVLHA GDLALDLRTR RASTPEATVD LTAREFALLE LFLRHPGQVL SRQQILSHVW GYDYDPGSNV VDVFIRALRK KIGAHRIETL RGMGYRLGG
|
| |