Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1248 |
Symbol | |
ID | 3581012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1451970 |
End bp | 1452773 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637684945 |
Product | helix-hairpin-helix DNA-binding motif-containing protein |
Protein accession | YP_289309 |
Protein GI | 72161652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAAAG ACGGGGGCCC TTGGGTAAAG ATCGGACAGA AGATTCGGGA GCACCGGCAA CACGCTGGAC TTTCCCAGGA AGAGCTGGCG AAGCTGGTTG CTCTTTCGCC GACCATGCTG AGCGCGATGG AGCGCGGCAC ACGCGGCATC AAAAGGGACC ATGTGGAACG TATCGACGCC GCGCTCGGCA TACCCGGCAC GTTGACGGAG CTGTGGGACC GGTCTCGGGG GGCCGGTCTG CCGCCCTGGT ATGAGCAGGT GGCCGACCTG GAACGGGCGG CCTCCGAGAT CTGGGTCTAC CACCCGCTCA TGGTGCCGGG TCTGCTGCAG ACCGAAGAGT ATGCCGCGCA CATCCTTCGG GTCAGCCATC CCCGGGCCAC TCCAGCCGAA ATCGAGGAGC TGGTCCGGGG GCAGATGGAA CGTAAAGCGA TCTTCGACCA GGAGCGGCCG CCCCGCTTGA TCGTGGTCGT GGACGAGGGG GTGCTGCGCC GCCCCACGGG GGGCCGTGAG GTCATGCGCC GCCAGATCGG CCATCTGCTG CAGGAGAGTT CGCGGCCGTT CGTGTCGATC CAGGTGGTGC CGTACGACAG TGAGCACCAT CCGGGGCTGT CGAACGGTTT TGCGCTGTTC ACGGTTCCCT GGAAGAACCC GGTCCTGTAC GTGGAGACTC GCCGGGCAGG AAAGCCCACG GACGATCCGG AAGCGGTGGA GGACTATTCC CAACTGTTCT CCGACTTGCG GGGTGCGGCC CTCCCATTGG GCTGTTCCCG CAGGCTGATG GCCCAGCTCC ACGAAAAGCT GTGA
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Protein sequence | MQKDGGPWVK IGQKIREHRQ HAGLSQEELA KLVALSPTML SAMERGTRGI KRDHVERIDA ALGIPGTLTE LWDRSRGAGL PPWYEQVADL ERAASEIWVY HPLMVPGLLQ TEEYAAHILR VSHPRATPAE IEELVRGQME RKAIFDQERP PRLIVVVDEG VLRRPTGGRE VMRRQIGHLL QESSRPFVSI QVVPYDSEHH PGLSNGFALF TVPWKNPVLY VETRRAGKPT DDPEAVEDYS QLFSDLRGAA LPLGCSRRLM AQLHEKL
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