Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1221 |
Symbol | |
ID | 3580712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1424008 |
End bp | 1424793 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637684917 |
Product | ketoacyl reductase |
Protein accession | YP_289282 |
Protein GI | 72161625 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.432142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACATCCA CACCTCGAAC CGCGATCGTC ACCGGAGCCA CCAGCGGCAT CGGGCTCGCT GTGGCCCGAG AACTGGCCAA CCGGGGCCAC CGTGTCTTCA TCTGCGCCCG CAACGGGGAA CGGGTAGCGG AAACCGCCAA ACAACTCTCC GACAACGGGA ATCTCCCCGT CGACGGCCAA GCCTGCGACG TCCGCTCCCT CGACGACATC CGGGCCATGG TCCGCGCCGC GGTCGAACGC TTCGGCACCA TCGGCATCCT CGTCAACAAC GCGGGACGCG GGGGAGGCGG GGTCACCGCC GACATCCCCG ACGACCTGTG GGACGACGTC CTCGCCACCA ACCTCACCAG TGTGTTCCGC GTAACCCGGG AAGTGCTCAC CACCGGCGGA ATGCGCGAAG CCTCCTGGGG ACGCATCATC AACATCGCCT CGACCGCCGG CAAGCAAGGA GTGGTCCTGG GCGCGCCCTA CTCCGCTTCC AAACACGGCG TCGTCGGATT CACCAAAGCC CTCGGCAACG AACTCGCGCC CACCGGGATC ACCGTCAACG CCGTATGCCC CGGCTACGTG GAAACCCCCA TGGCGGAAGC GGTTCGGCAG CGCTACGCCC AAGCCTGGCA GATCAGCGAG GACGAAGTCC TCGCGAAATT CCAAGCCAAA ATCCCGCTCG GCCGCTACTC CACCCCCGAA GAAGTGGCCG GACTGGTCGG CTACCTCACC ACCGAGACCG CAGCGTCGAT CACTTCACAG GCACTCAACG TCTGCGGCGG CCTCGGCAAC TTCTGA
|
Protein sequence | MTSTPRTAIV TGATSGIGLA VARELANRGH RVFICARNGE RVAETAKQLS DNGNLPVDGQ ACDVRSLDDI RAMVRAAVER FGTIGILVNN AGRGGGGVTA DIPDDLWDDV LATNLTSVFR VTREVLTTGG MREASWGRII NIASTAGKQG VVLGAPYSAS KHGVVGFTKA LGNELAPTGI TVNAVCPGYV ETPMAEAVRQ RYAQAWQISE DEVLAKFQAK IPLGRYSTPE EVAGLVGYLT TETAASITSQ ALNVCGGLGN F
|
| |