| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1027 |
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| Symbol | |
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| ID | 3579657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1201754 |
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| End bp | 1203526 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637684722 |
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| Product | hypothetical protein |
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| Protein accession | YP_289088 |
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| Protein GI | 72161431 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTCT GGGAAAACCG TGTGCCGCTC CTCGGCGGCC CTCCACCGCT GGCCGGGCCG
TACCCTGGCG GGGTGACAGT ACCCAAGGAC CTGGTCCAGG GGTCTTTCGA CGACCTGGGC
CGCCCCCTCA CGGACGTGAC GTTCGTGGTG GTCGACGTGG AGACCACCGG CACCCACCCG
GCGACGGCAG CGCTGATCGA GGTCGGGGCG GTGCGTCTCC GCGACGGACA GGTCCTGGAC
GAGTTCACCA CCCTGGTGAA CCCGCACGCC CCTGTGCCCG CGTCGATCAC CCTGCTCACC
GGGATCACCA CGGCCATGGT GGAGTCCGCG CCCTCGCCTG CGGCGGCGCT CTCCGCGTTC
CTGGACTTCG CCGGGTTCCG TCCCGGCACC GTGCTGGTCG CGCACAACGC CCCGTTCGAC
GTGCGTTTCC TCAAAGCCGC GTGTGCCCGG CACGGGATCC CCTGGCCCTC CCCCGCGGTG
CTGGACACGC TGCAGCTCGC CCGCCGCCTC GTCCCGCGCG GCGAGGTCCG CAATCACCGG
CTCGACACGC TCGCCCGGGT CTTCGGTGCC CACCCGCCCG CCCACCGGGC GCTCGACGAC
GCCCGCGCCA CCGCGGACGT GCTGCGCGGC CTGGTGGGGC GGCTCCGTGC CCGCGGTGTG
GACACATGGG AGGAGCTGCG CGCATTCCGC AGCCCTGTCA CTTCCGGGCA GCGCAGCAAA
CGCCACCTGG CCGACGGGAT TCCGGAAGCG CCCGGCGTCT ACGTTTTCGA AGACGCCTCC
GGCGACCCGC TGTATGTGGG GAAAAGCGTC AACCTGCGGG CCCGGGTGCG GTCCTATTTC
ACCGCCGCGG AACAGCGCGG GCGGATCAAG GAGATGGTGG GCCGGGCCGT CCGCGTGCAG
CCGATCGTGT GCGCCACGGC CGTGGAAGCC GAAGTCCGGG AGCTGCGGCT GATCGCCGCG
CGCAAACCGC CCTACAACCG GCGGTCCCGG CACCCGGAGC GCGCCCCCTG GCTGGTCATC
ACCGCGGAAG AGTTCCCGCG CCTGGCCGTC GTGCGGCAGG TGGGCGACAA CTACCTGGGC
GCCCTCGGGC CGTTCTCCAG TTCCCGGACG GCCCTGCTAG CCCGGGACGC CCTCCACCAG
GCGTTCCCCG TGCGCCAGTG CACGCACCGC ATCACCCCGC CCCGCCCCGA TGCGGCCTGC
GCGCTGGCGG AGATGGGCCG CTGCGGGGCG CCGTGCACCG GAGCCCAGTC GGCCGCCGAG
TACGCCGCGC ACGTCCAGGC CGTGGCCCAG GCGATGACTG GTGACGTGTC CGCGGTGGTG
GCGGCCCTCA CTGCGCGGAT CGACACGCTC GCCCGCGAGC TGCGCTACGA GGAGGCGGCC
CTTCACCGGG ACCGGCTGTC GGCGTTCCTG GCGGCTGCGG TGCGCACGCA GCGGGTGCGG
GCTCTCAGCG CGGTCCCGCA CCTGGTGGCG GCCCGGCCTG CGGGGGCGGA CTGGGAGGTG
TGCGTGGTGC GGTACGGCCG CCTGGCGGGC AGCGCCCGCC TCCGTCCCGG TGCTGATCCG
CACACGCTGC TGCGCACCCT GGTGCGCACC GCGGAGAGCG TGCCGCCCCC TGCGGGTGCG
CTGCCGCGCG CGGACGCCGC GGAGACCGAG TGTCTGCTGC GCTGGTTGGA GGCGCCCGAC
GTCCGGCTGC TGGAGGTGGA GGGGTCGTGG GTCTCCCCCG TCGGCGGCGC GGAACGCTAC
CGGCAGTGGA TCTACCGGCA TACGCCGGCA TAG
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| Protein sequence | MLFWENRVPL LGGPPPLAGP YPGGVTVPKD LVQGSFDDLG RPLTDVTFVV VDVETTGTHP
ATAALIEVGA VRLRDGQVLD EFTTLVNPHA PVPASITLLT GITTAMVESA PSPAAALSAF
LDFAGFRPGT VLVAHNAPFD VRFLKAACAR HGIPWPSPAV LDTLQLARRL VPRGEVRNHR
LDTLARVFGA HPPAHRALDD ARATADVLRG LVGRLRARGV DTWEELRAFR SPVTSGQRSK
RHLADGIPEA PGVYVFEDAS GDPLYVGKSV NLRARVRSYF TAAEQRGRIK EMVGRAVRVQ
PIVCATAVEA EVRELRLIAA RKPPYNRRSR HPERAPWLVI TAEEFPRLAV VRQVGDNYLG
ALGPFSSSRT ALLARDALHQ AFPVRQCTHR ITPPRPDAAC ALAEMGRCGA PCTGAQSAAE
YAAHVQAVAQ AMTGDVSAVV AALTARIDTL ARELRYEEAA LHRDRLSAFL AAAVRTQRVR
ALSAVPHLVA ARPAGADWEV CVVRYGRLAG SARLRPGADP HTLLRTLVRT AESVPPPAGA
LPRADAAETE CLLRWLEAPD VRLLEVEGSW VSPVGGAERY RQWIYRHTPA
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