Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0981 |
Symbol | panB |
ID | 3578994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1148816 |
End bp | 1149658 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637684676 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_289042 |
Protein GI | 72161385 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTC ACACCCCCGC TCCTGCTTTG TATGGCGGCT CCGCAAACCG CCGGGTCACG GTTCAGGACT TGGCCGCAGC GAAAGAGCGC GGCGAACGCT GGCCGATGCT CACCGCCTAT GACGCGCTGA CTGCCCGGAT TTTCGACGAG GCGGGCATTC CGGTGCTGCT GGTGGGTGAC TCTGCTGCGA TGGTGGTGTT CGGCTACGAC TCCACGATCC CGGTCACCCT TGACGACATG ATCCCGTTGA CGGCCGCGGT GTCGCGGGCG ACGAAGCGGG CGCTGGTGGT GGCTGACCTC CCGTTCGGCT CCTACCAGGC CGGTCCGGAG CAGGCTTTGG AGTCGGCGGC GCGGCTGATG AAGGAGGGCG GCGCCCAGGC GGTCAAGCTG GAGGGCGGCC ACCGGGTCAT CGCCCAGGTG GAGGCTTTGG TGTCGGCGGG TATCCCGGTG ATGGGCCACA TCGGGTTGAC GCCGCAGTCG GTGAATGTGC TGGGCGGCTA CCGCGTGCAG GGCCGCAGCG AGGAGGCGGC CGAGGCGCTG CTGTCTGATG CGAAGGAGCT TGAGCGGGCG GGCGTGTTCT CGGTGGTGCT GGAGTGCGTG CCTGCGCGGG TGGGCGCGGA GATCACCCGG CAGTTGACGG TGCCGACGAT CGGGATCGGC GCGGGTCCGG ACACGGACGC CCAGGTGCTG GTGTGGCAGG ACATGGCCGG GTTGTCGCCG CGGGTCGCCA AGTTCGTCAA GTCGTACGCG AATCTGGCGG AGCAGTTGCG GGACGCTGCC ACGAGTTTCG CGGAGGAAGT GGTGGCGGGC ACGTTCCCGG ACGAGCAGCA CTCCTACGCC TAG
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Protein sequence | MSSHTPAPAL YGGSANRRVT VQDLAAAKER GERWPMLTAY DALTARIFDE AGIPVLLVGD SAAMVVFGYD STIPVTLDDM IPLTAAVSRA TKRALVVADL PFGSYQAGPE QALESAARLM KEGGAQAVKL EGGHRVIAQV EALVSAGIPV MGHIGLTPQS VNVLGGYRVQ GRSEEAAEAL LSDAKELERA GVFSVVLECV PARVGAEITR QLTVPTIGIG AGPDTDAQVL VWQDMAGLSP RVAKFVKSYA NLAEQLRDAA TSFAEEVVAG TFPDEQHSYA
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