Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0938 |
Symbol | |
ID | 3579394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1103758 |
End bp | 1104780 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684633 |
Product | LacI family transcription regulator |
Protein accession | YP_288999 |
Protein GI | 72161342 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0104625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGTC GGCGACGTCC GACACTAGAG ATGGTGGCCG CGTTGGCCGG GGTCGGCCGA GGCACGGTGT CTCGGGTGAT CAACGGCTCT GACCAGGTCA GTCCGGCCAC GCGAGAGGCC GTGAAGCGGG CGATCAAAGA GCTGGGCTAC GTGCCGAACC GCGCAGCCCG CACCCTGGTC ACCCGACGTA CCGACACCGT AGCCCTGGTG GTGTCGGAAA ACAACCAGAA GCTCTTCGCC GAACCCTTCT ATGCCGGGAT CGTGCTCGGC GTGGGGGTTG CTCTGTCCGA ACGGGGATTC CAGTTCGTCC TGGCCACGGG CCGCTCCGGG ATAGAGCATG AGCGGCTGGG CGGCTACCTG GCCGGACAGC ACGTCGACGG GGTCCTCCTG CTGTCGCTCC ACCGCGACGA CCCGCTGCCG CAGATGCTGG ACGAGGCCGG GGTGCCGTAC GTCTACGGCG GCCGTCCGCT CGGCGTCCCC GAAGAACAGG TGTCCTATGT CGATATCGAC AACATCGGCG GGGGACGCCA GGCCACCCAG CGGCTGATCG AGACCGGGCA CCGGCGGATC GCTACGATCG CGGGCCCGCA GGACATGGTC GCTGGTGTGG AACGCCTCCA GGGGTATCGC GAAGCACTGC TCGCCGCGGG GATGGAGTAC GACGAGACGC TGGTGAGCTA CGGTGACTTC ACCTACGACA GCGGGGTGGC CGCGATGCGG GAGCTGCTGG ATCGGGCCCC CGACGTGGAC GCCGTGTTCG CGGCCTCCGA CTTGATGGGG CTGGCCGCGC TGCGGGTGCT GCGTGCTTCG GGACGCCGCG TGCCCGAGGA TGTGGCGGTG GTCGGCTACG ACGACTCGAC CGTAGCCGAG CACGCCGAAC CGCCGATGAC CAGCGTCAAC CAGCCCACCG AGCTGATGGG CCGGGAGATG GCCCGGCTGC TCGTGGACCG GATCACCGGG GAGACCACCG AACCGGTGCG GCTGGTGCTG GAGACCCATT TGATGGTGCG GGAATCCGGG TGA
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Protein sequence | MERRRRPTLE MVAALAGVGR GTVSRVINGS DQVSPATREA VKRAIKELGY VPNRAARTLV TRRTDTVALV VSENNQKLFA EPFYAGIVLG VGVALSERGF QFVLATGRSG IEHERLGGYL AGQHVDGVLL LSLHRDDPLP QMLDEAGVPY VYGGRPLGVP EEQVSYVDID NIGGGRQATQ RLIETGHRRI ATIAGPQDMV AGVERLQGYR EALLAAGMEY DETLVSYGDF TYDSGVAAMR ELLDRAPDVD AVFAASDLMG LAALRVLRAS GRRVPEDVAV VGYDDSTVAE HAEPPMTSVN QPTELMGREM ARLLVDRITG ETTEPVRLVL ETHLMVRESG
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