| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0907 |
|---|
| Symbol | |
|---|
| ID | 3579207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1068320 |
|---|
| End bp | 1069144 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637684602 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_288968 |
|---|
| Protein GI | 72161311 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 84 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCC CACAGTGCAC CCCCGCACCG AACAGAATCG AACGAGGCCA GAAGATGATC
CCCGATCAGC GTCGCGAACA CATCCTCAAA CTGCTGCAGG AACGCAACGT CCTCAGCATC
AGTGAGCTCA CGTCGATGCT GTCCGTCTCC CACATGACGG TGCGCAGGGA TATCCAGGCG
CTGGAGAACG AGGGCAAGGT CCTCTCCGTG ACCGGGGGCG TCCGCCTGGC CGCACGTCTG
AAGAGCGAAC CCTCCTATCT GGCCAAGGCC CAGCTCGAGG TCCCGGCCAA ACGCGCCATC
GCCCGAGCCG CCGCCGAGCT CGTCCGGGAG AATTTCACGA TCTTCTTGGA TGCGGGGACG
ACCACGCTCC AGATGGTGCC GCTGCTGACC GACAAGGCAG GGCTGACCGT GGTGACCAAC
GACTTCAACG TGGTCGGCCA CCTGATGGAG TACCCCAATA TTGAACTGAT CCACACCGGG
GGTGTGGTGT CGCACGCGGA CCATTCCTCG GTCGGCCAGT TCACCGCCGA GTTCCTCCGC
CGGGTCAACG TGGATATCGC GTTCATCGCG AGCAGCTCGT GGGATGTGGA ACGCGGTTCC
ACGACGCCGT CGGAGGCCAA GGTGGTGGCC AAGCAGGAGC TGCTGCGGGT GGCGTCCAAG
AGTGTGCTGA CGGTGGACAG CACCAAGTAC GGCAAGTTCG GTACGTTCAC GGTCGCCCGG
CTGGAAGAGT TCGACCTCAT CATCACGGAC GACCGCCTGC CCGCCAACGC GGTGCAGCAG
ATGCGGGAGC GGGATATCCG CCTGCAGCTC GTCCCGTTGA ACTGA
|
|---|
| Protein sequence | MRVPQCTPAP NRIERGQKMI PDQRREHILK LLQERNVLSI SELTSMLSVS HMTVRRDIQA
LENEGKVLSV TGGVRLAARL KSEPSYLAKA QLEVPAKRAI ARAAAELVRE NFTIFLDAGT
TTLQMVPLLT DKAGLTVVTN DFNVVGHLME YPNIELIHTG GVVSHADHSS VGQFTAEFLR
RVNVDIAFIA SSSWDVERGS TTPSEAKVVA KQELLRVASK SVLTVDSTKY GKFGTFTVAR
LEEFDLIITD DRLPANAVQQ MRERDIRLQL VPLN
|
|---|
| |