| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0881 |
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| Symbol | |
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| ID | 3579570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1039017 |
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| End bp | 1040699 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684576 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_288942 |
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| Protein GI | 72161285 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCACAC AGGTTGCGAC GGCACCGAAG CCGTCGGTCC GGGCCCGGCC CGGCTCAAAG
ATCATCAGCG TGATCACGAC GACTGACCAC AAGGTGATCG GGAACATGTA CCTGATCACC
TCGTTCGCGT TCTTCCTGCT CGCCGGAGTC ATGGCGCTGC TGATCCGAGC CGAGTTGATG
TACCCGGGCA TGCAGCTGAT GAACAACGAG ACCTACAACC AGTTGTTCAC CATGCACGGC
ACGATCATGC TGTTCCTGTT CGCGACCCCG CTGTTCGCGG GTTTTGCGAA CGCGCTCGTG
CCGCTGCAGA TCGGCGCGCC TGACGTGGCT TTCCCCCGCC TCAACCAGCT CGGGTACTAC
CTGTACCTGT TCGGCGGGCT GATCACGATC GCCGGGTTCA TCACGCCCGG CGGTGCGGCG
AGCTTCGGCT GGTTCGCCTA CGTGCCGCTC TCGGATGCGG TGCGGTCCCC CGGCATCGGC
GGCGACTTGT GGATCCTCGG CCTGGCGCTG ACCGGCCTGT CCTCGATCCT GGGTGCGGTC
AACTTCATCA CCACGGTCGT GTGCATGCGC GCCCCCGGCA TGACCATGTT CCGCATGCCG
ATCTTCACGT GGAACGCGGC GCTGACCGGT GTGCTGATCC TGCTCACCTT CCCCGTGCTC
ACCGGTGCCT TCATCGCCCT GCTCGCCGAC CGGATCGTCG GCACCCACGT GTTCGACCCC
GAGCATGGCG GGCCGATCCT CTACCAGCAC CTGCTGTGGT TCTTCGGCCA CCCGGAGGTC
TACATCTTGG CCTTGCCGTT CTTCGGCATC GTCACCGAGA TCCTCCCGGT GTTCAGCCGC
AAGCCGATCT TCGGCTACAA GAGCCTGATC GGCGCCACCA TCGCGATCGC CGGGCTGTCG
GGAACCGTGT GGGCGCACCA CATGTTCCCC ACCGGCGCGG TGCTGCTGCC GTTCTTCTCC
TTCATGACCT TCCTCATCGC GGTGCCGACC GGCGTGAAGT TCTTCAACTG GATCGGCACC
ATGTGGGGCG GCCAGCTCAC CTTCGAGTCG CCGATGCTGT TCTCCATCGG CTTCATGGTC
ACCTTCCTCT TCGGCGGGCT GACCGGCATC ATGCTCGCGT CGCCGCCCAT GGACTTCCAC
GTGACCGACT CGTACTTCGT GATCGCCCAC TTCCACTACA CGCTGTTCGG CACTGTGGTG
TTCGCGATGT TCGCGGGCTT CTACTTCTGG TGGCCGAAGC TCACCGGCAA GATGCTCAAC
GAGACGCTGG CCAAGTGGCA CTTCTGGACG CTGTTCTTCA GCTTCCACGG CACCTTCCTC
GTCCAGCACT GGCTGGGTGC GGAAGGCATG CCGCGCCGCT ACGCCGACTA CCTGCCGTCG
GACGGGTTCA CCCTGCTCAA CCAGATCTCG TCGGTGTCCT CGTTCGTCTT GGGCATCTCC
ACGCTGATCT TCTTCTGGAA CGTCTGGGTG ACCGCGAAGA AGGCGCCGAA GGTGACCGTG
GACGACCCGT GGGGCTACGG CTGCTCGCTG GAGTGGGCGA CCTCCTGCCC GCCGCCGCGG
CACAACTTCG TCTCGCTGCC GCGGATCCGC TCTGAGCGGC CCGCCTTCGA CCTGCACCAC
CCGTATGCCG CTGTCCCGGT TGAGGAGCAG GACACCGCAT CGGACGCAGC GGCACGGAAA
TGA
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| Protein sequence | MATQVATAPK PSVRARPGSK IISVITTTDH KVIGNMYLIT SFAFFLLAGV MALLIRAELM
YPGMQLMNNE TYNQLFTMHG TIMLFLFATP LFAGFANALV PLQIGAPDVA FPRLNQLGYY
LYLFGGLITI AGFITPGGAA SFGWFAYVPL SDAVRSPGIG GDLWILGLAL TGLSSILGAV
NFITTVVCMR APGMTMFRMP IFTWNAALTG VLILLTFPVL TGAFIALLAD RIVGTHVFDP
EHGGPILYQH LLWFFGHPEV YILALPFFGI VTEILPVFSR KPIFGYKSLI GATIAIAGLS
GTVWAHHMFP TGAVLLPFFS FMTFLIAVPT GVKFFNWIGT MWGGQLTFES PMLFSIGFMV
TFLFGGLTGI MLASPPMDFH VTDSYFVIAH FHYTLFGTVV FAMFAGFYFW WPKLTGKMLN
ETLAKWHFWT LFFSFHGTFL VQHWLGAEGM PRRYADYLPS DGFTLLNQIS SVSSFVLGIS
TLIFFWNVWV TAKKAPKVTV DDPWGYGCSL EWATSCPPPR HNFVSLPRIR SERPAFDLHH
PYAAVPVEEQ DTASDAAARK
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