Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0867 |
Symbol | |
ID | 3579554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1023371 |
End bp | 1024537 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637684560 |
Product | sigma-70 factor |
Protein accession | YP_288928 |
Protein GI | 72161271 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.515579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAAAT TCAATCCCTC TACTCCGGGA AAACGCAGGC ACACTATAAG AGTGGTTTTT CCGGTGTCAC CTAAGAGGGC GTCGTCGATG CGAGATACGG CGGCTGAGAT CGTGGAAAGG AGAACGCCCG CTGGCCCCGC GGCCGCGGTG GAACGCAGTG GCGGTCCTCC TGTCGAGGCG GTCGGGGGAG AACCGGAGTA CGTGGACCGC GACGATTTCG CGGAGCACCC CGAAACCCGC ACCTCCTCGG GCGACATCGT CCACGCCTAT CTGCGAGAAA TCGGCCGAGT CCCCCTGCTC ACGGCTGAAG AAGAAGTCGA ACTCGCCAAA GCCATCGAAA TCGGCCTCTA CGCCGAGCAG AAACTGCGCG CCGCACGCAC CGGTCCGGTC CCCGCACAGT ACTCCCCTGA ATGGTTTGAG GACCTCAACG AGCTCGTCCG CGAAGGAAAA CTCGCCAAAC GCCGCCTGAT TGAATCTAAC CTGCGCCTGG TGGTGTCGGT CGCCAAGCGC TACCTGGGCC GCGGTCTGGC CCTGCTCGAC CTGATCCAGG AGGGCAACCT GGGGCTCATC CGCGCGGTGG AGAAGTTCGA CTACACCCGC GGATACAAGT TCTCCACCTA CGCCACCTGG TGGATCCGGC AGGCGATCAC CCGCGCCATC GCGGACCAGG CCCGCACCAT CCGGGTCCCC GTGCACATGG TGGAGAGCAT CAACCGGCTG GCCCGCACCC GCCGCCGCCT GCACCAGGAG CTCGGCCGAG AACCGACCTT GCACGAGCTC TCCCGCGAAC TCAACGTCGA CCACGACCGG GTCGTGGAAA TCCACCGCGT CTCCCAGGAG CCCATTTCCC TGCACACGCC GATCGGCGAG GAAGACTCCG CGTTCGGCGA CTTCATCGAG GACACGGACG CAGTCCCGCC GGTGGAGGCC GCGGCGTTCG TCATGCTCCA GGACCAGTTG GCTCAGGTCC TGGGCGGGCT TTCAGAACGG GAGCAGCGGG TGATCACGCT CCGTTTCGGG TTGGAGGACG GAAAACCGCA CACTCTTGAA GAGGTGGGAC GGAAGTTCGG CGTGACCCGG GAACGCATCC GGCAGATCGA GTCCAAGACG CTCGCGAAAC TCCGGCAGCC CTCCCGAGCG CGCATCCTCC GCGACTACCT GGGATAA
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Protein sequence | MTKFNPSTPG KRRHTIRVVF PVSPKRASSM RDTAAEIVER RTPAGPAAAV ERSGGPPVEA VGGEPEYVDR DDFAEHPETR TSSGDIVHAY LREIGRVPLL TAEEEVELAK AIEIGLYAEQ KLRAARTGPV PAQYSPEWFE DLNELVREGK LAKRRLIESN LRLVVSVAKR YLGRGLALLD LIQEGNLGLI RAVEKFDYTR GYKFSTYATW WIRQAITRAI ADQARTIRVP VHMVESINRL ARTRRRLHQE LGREPTLHEL SRELNVDHDR VVEIHRVSQE PISLHTPIGE EDSAFGDFIE DTDAVPPVEA AAFVMLQDQL AQVLGGLSER EQRVITLRFG LEDGKPHTLE EVGRKFGVTR ERIRQIESKT LAKLRQPSRA RILRDYLG
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