Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0854 |
Symbol | |
ID | 3579636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1008592 |
End bp | 1009374 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637684547 |
Product | hypothetical protein |
Protein accession | YP_288915 |
Protein GI | 72161258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.231592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGCGC TCGCCCCTGG GATGCCGGTG GACTACGTGG CCATCGGCGA CAGTTTCACC GAAGGCGTGG GGGACTGGTA CCCCGACGGC ACCCCGCGCG GCTGGGCGGA CCGGTTCGCC GACCGCCTGG CGGAGTACAG CGGACAGTTG CGTTACGCCA ATCTCGCGGT GCGCGGCAGG CTGCTGCGCC AGGTCATGGA GGAGCAGCTG CCCCGCGCTT TGGAGTTGGC CCCCACCCTG GTGACGTTCA GCGCGGGCGG AAACGACCTG CTCCGCCCGA GCGGCGACCC GGACCGGCTG GCGCGGGCCC TGGAGATCGG GGTGCGTCAG CTCCGCGCGT CCGGCGCCGA GGTGGTGCTG TTCACCGGGG TCAACATCGC CACCGGGTAC ATGCGCGGGC TGATCGGCCG GTTCGCCCGC TACTACCTCA ACATCCGCGC GATCGCGGAC CGCTACGGCT GCTTCCTCGT CGACCAATGG TCTATGCCTG TGTTCCGGGA CCCGCGGGCC TGGGACACCG ACCGGCTGCA CCTGTCGGCG GAGGGGCACC GCCGGTTGGC GCTGCGGGTG TGCGAAGTCG TGGGGGTGCC GGTCGACGAG GACTGGAACG CCCCGTGGCC GCCGGCCGCT CCAGTGTCGC GCGCGCAGGC GTGGCGGGAG GATGCGCGCT GGGTCCGCCA GTATCTGGTG CCGTGGATCC ACCGGCGGCT GACCGGCCGT TCGTCCGGGG ACACGGTGAC CGCAAAGCGT CCGGTGTTGG AGAAGTACCC GCCGCAGGAC TAG
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Protein sequence | MGALAPGMPV DYVAIGDSFT EGVGDWYPDG TPRGWADRFA DRLAEYSGQL RYANLAVRGR LLRQVMEEQL PRALELAPTL VTFSAGGNDL LRPSGDPDRL ARALEIGVRQ LRASGAEVVL FTGVNIATGY MRGLIGRFAR YYLNIRAIAD RYGCFLVDQW SMPVFRDPRA WDTDRLHLSA EGHRRLALRV CEVVGVPVDE DWNAPWPPAA PVSRAQAWRE DARWVRQYLV PWIHRRLTGR SSGDTVTAKR PVLEKYPPQD
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