Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0853 |
Symbol | |
ID | 3579635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1007744 |
End bp | 1008592 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684546 |
Product | undecaprenyl pyrophosphate synthetase |
Protein accession | YP_288914 |
Protein GI | 72161257 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.563671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCCCA AGACCGTCTT CTCGACCGAC ACCCACCGGG AGCCGATACC CCCGCAACCG CACCCCAGCG GGGCTCGGCC ACCCCAGTTA CCCCGAGAAC TCATTCCCCG GCACGTGGCA ATCGTCATGG ACGGCAACGG CCGCTGGGCC AAGCAGCGCG GCCTGCCCCG TACTGAAGGG CACAAGGCGG GCGAGTCCTC CCTGTTCGAC GTGATCGAGG GAGCGCTGGA GCTCGGCGTG CCCTACCTGT CCGCCTACGC GTTCTCCACG GAGAACTGGA AGCGCTCCCC GGACGAGGTG CGCTTCCTCA TGGGGTTCAA CCGCGACGTG ATCCGACGCC GCCGTGACGA GCTGCACGCA CGCGGGGTGC GGGTGCGCTG GGCGGGACGG CCGGGACGGC TGTGGAAGAG CGTCATCAAA GAGCTCACCG AAGCCGAAGA GCTGACCAAG CACAACACCA AGCTCACGCT GCAGTTCTGC GTGAACTACG GGGGCCGTGC CGAGATCGCG GACGCGGCCG CGGCCCTGGC CCGGGATGTG GCTGCCGGCC GCCTCTCCCC CAACCGGGTC ACCGAGGCCA CGCTCGCTCG CTACCTGTAC CACCCGGACA TCCCCGACGT GGACCTGTTC ATCCGTTCCT CCGGGGAGCA GCGCCTCTCC AATTTCCTGC TCTGGCAGTC GTCGTACGCG GAATTCGTGT TCCTCGACAC GCTCTGGCCC GACTTCGACC GGCGGCACTT CTGGCAGGCC TGCGAGATCT ACGCCCGCCG GGACCGTCGC TACGGGGGAG CCGAACCCAA CCCGGTGGGG CCGCCGCAGT CCGCTGCCGG AGCGCAGGGG CAGGACTGA
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Protein sequence | MSPKTVFSTD THREPIPPQP HPSGARPPQL PRELIPRHVA IVMDGNGRWA KQRGLPRTEG HKAGESSLFD VIEGALELGV PYLSAYAFST ENWKRSPDEV RFLMGFNRDV IRRRRDELHA RGVRVRWAGR PGRLWKSVIK ELTEAEELTK HNTKLTLQFC VNYGGRAEIA DAAAALARDV AAGRLSPNRV TEATLARYLY HPDIPDVDLF IRSSGEQRLS NFLLWQSSYA EFVFLDTLWP DFDRRHFWQA CEIYARRDRR YGGAEPNPVG PPQSAAGAQG QD
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