| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0839 |
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| Symbol | |
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| ID | 3579408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 994380 |
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| End bp | 995519 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684532 |
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| Product | heat shock protein DnaJ |
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| Protein accession | YP_288900 |
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| Protein GI | 72161243 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0215483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAGAG ACTATTACGA GATCCTTGGT GTTCGCCGCG ACGCGACCCA GGACGAGATC
AAAAAGGCAT ACCGCCGGCT CGCACGTGAA CTGCATCCCG ACGTCAACCC CGACCCAGAG
ACCCAGGAGC GGTTCAAGGA AGTCGCCCAA GCCTACGAGG TGCTCTCCAA CCCGGAGAAG
CGCCGCATGT ACGACATGGG CGTCGACCCG TTCGCGCGCG GCGGGGCAGC GGGCGGCGGA
GCCACCGGCT TCGGAGCGGG CTTCCCGTTC GACGACTTGA TGAACGCGTT CTTCGGGGGG
AGCACGGGAA CCCGCGCGGC ACGCGAGCGG ATGCGCCGGG GCCGGAGCAT CAAGGTGCGG
GTCGAGCTCG ACCTCGAAGA GACCGCGTTC GGCGTCACCA AGGACATCAC GTTCCCCACC
GCGGTCGTGT GCAACACCTG CCAGGGTGAG GGCACGGCGC AGGGAACCCA CCCCGAGACC
TGCGACATGT GCGGTGGCCG CGGTGAAGTC TCCCAGGTCA CTCGCTCGTT CCTCGGCCAA
GTCATGACGA CTCGGCCGTG CCCGCAGTGC GCGGGCCAGG GCACGATCAT CCGCAACCCC
TGCCCGGACT GCGCCGGGGA AGGCCGGGTC CGGGAGCGCG TCACCCGCAA AGTGCAGATC
CCCGCGGGTG TCGAGGACGG GACCCAGATC CAGCTGGCGG GCGAAGGCGA GGTCGGCCCG
AACGGCGGAC CGCGCGGCGA CATCTTCCTG GAGATCGTGG AACGCCCGCA CCCGATCTTC
GAACGGCGCG GCGACGACCT GCACTGCACG GTCACCGTTC CGATGACCGC GGCCGCGCTG
GGGGCGACGC TGACCATCGA CACCCTCGAC GGCCCGGAGG AGATCGACCT GCGCCCCGGC
ACCAATTCCG GGCAGGTCAT CACCCTGCAG TCGAAGGGCT GCCACCACCT CAACGCGCCG
GGCCGCGGCG ACCTGCACAT CCACGTCACG GTGGAGACCC CCACCCGACT GGACGAAGAG
CAGGAAGCGC TGCTGCGCAA GCTCGCGGAA CTCCGCGGCG AGGACCGGCC GCCGGGCAAG
TTCAGCCCGG GGCAGGGCAA TTTCTTCTCC CGCATCCGTG ACGCGTTCGG CGCGCGGTGA
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| Protein sequence | MARDYYEILG VRRDATQDEI KKAYRRLARE LHPDVNPDPE TQERFKEVAQ AYEVLSNPEK
RRMYDMGVDP FARGGAAGGG ATGFGAGFPF DDLMNAFFGG STGTRAARER MRRGRSIKVR
VELDLEETAF GVTKDITFPT AVVCNTCQGE GTAQGTHPET CDMCGGRGEV SQVTRSFLGQ
VMTTRPCPQC AGQGTIIRNP CPDCAGEGRV RERVTRKVQI PAGVEDGTQI QLAGEGEVGP
NGGPRGDIFL EIVERPHPIF ERRGDDLHCT VTVPMTAAAL GATLTIDTLD GPEEIDLRPG
TNSGQVITLQ SKGCHHLNAP GRGDLHIHVT VETPTRLDEE QEALLRKLAE LRGEDRPPGK
FSPGQGNFFS RIRDAFGAR
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