| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0661 |
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| Symbol | |
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| ID | 3580771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 767322 |
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| End bp | 768929 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684354 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_288722 |
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| Protein GI | 72161065 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCGAGA CGCTTTCCGA CCGCCTGACC ACGGTCTTCT CCTCGCTGCG CGGCAAAGGC
CGTCTCTCTG AGGAGGACAT CAACACCACC GCACGCGAGA TCCGTGTCGC CTTGCTGGAG
GCCGACGTCG CGCTGCCCGT CGTGCGCGAG TTCATCGCAC GGGTCAAGGA GCGGGCCCGC
GGTGCGGAGG TTTCCAAGGC GCTGAACCCG GCCCAGCAGG TCATCAAGAT CGTCCACGAG
GAGCTCATCG AGGTCCTCGG CGGGGAGACG CGGACGATCC GGTTCGCGAA GACCCCGCCG
ACGGTCATCA TGCTGGCGGG TCTGCAAGGT GCCGGTAAGA CGACCTTGGC CGGCAAGCTC
GCCAAGTGGC TGGCCGACCA GCGCAACACT CCGCTGCTGG TCGCAGCCGA CTTGCAGCGC
CCCAACGCGG TCACCCAGCT CCAGGTGCTG GGGGAGCGGG CGAATGTCGC GGTGTACGCG
CCTGAACCGG GCAACGGCGT GGGCGACCCG GTCGAGGTGG CCCGTTCGTC GATCGACTAT
GCGCGGCGCA ACAACTACAA CGTCGTCATC ATCGACACCG CGGGCCGCCT GGGCATCGAC
GAGGAGATGA TGCAGCAGGC CGCCGACATC CGCGACGCGG TCTCCCCGGA CGAGATCCTC
TTCGTCGTCG ACGCGATGAT CGGTCAGGAC GCGGTGACGA CGGCGCAGGC GTTCCTGGAA
GGTGTCGGCT ACGACGCGGT CGCGCTGACC AAGTTGGACG GCGACGCGCG GGGCGGTGCC
GCGCTGTCGA TCCGGCACCT CACCGGTCGG CCGATCATGT TCGCGTCCAC GGGGGAGAAG
CTCGAGGACT TCGACCTTTT CCACCCCGAC CGCATGGCGT CGCGCATCCT CGACATGGGT
GACGTGCTCA CCCTGATCGA GCAGGCGCAG CGGACGTTCG AGGAAGAAGA AGTCGCGAAG
ATGGCCAGCA CGCTGGCCTC GGACGAGGAC TTCACTCTGG AAGACTTCCT CGAGCAGATG
ATGATGATCC GCAAGCTCGG CCCCATCGGC AAACTGCTGC AGATGATGCC GGGGATGGGG
CAGATGCGGG AGCAGATCGA GAACATCGAC GAGCGCGAGC TGGACCGGGT GGCGGCCATC
ATCCGGTCGA TGACCCCGGA AGAGCGAGCC AACCCCAAGA TCATCAACGG CTCCCGCCGC
CTGCGGATCG CCAAGGGTTC GGGAACCCAG GTCAGCGACG TCAGCGGCCT GGTCACGCGC
TTCTTCGAAG CGCAGAAGAT GCTCCGCCAG CTCAAGCAGG GCGGGCTCCC GGGCATGCCC
GGGATGCCCG GCTTCCCCGG CATGCCCGGC ATGGGGCCCG GCCGGAAGAA GGCGGCCAAG
GCAGCGGGGA AGAAGGGCAA GAAGAACAAG CAGCGCAGCG GCAACCCGCT GAAAGCCCGG
CAGCAGGAGG CCGAGCGCGC CGCACAGCGC GAACGGAAGC GGGCCGAGGA GCCCGCTCCC
CCCACCCTGC CGCCGGGGCT GGGCGCCGGA ATGCCCCAGT TGCCTCCCGC GTTCGGGGGC
GGGCTTCCGG ACCTGTCCGC TCTCAAACCG CCGAAGAAGA AAAAGTAG
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| Protein sequence | MFETLSDRLT TVFSSLRGKG RLSEEDINTT AREIRVALLE ADVALPVVRE FIARVKERAR
GAEVSKALNP AQQVIKIVHE ELIEVLGGET RTIRFAKTPP TVIMLAGLQG AGKTTLAGKL
AKWLADQRNT PLLVAADLQR PNAVTQLQVL GERANVAVYA PEPGNGVGDP VEVARSSIDY
ARRNNYNVVI IDTAGRLGID EEMMQQAADI RDAVSPDEIL FVVDAMIGQD AVTTAQAFLE
GVGYDAVALT KLDGDARGGA ALSIRHLTGR PIMFASTGEK LEDFDLFHPD RMASRILDMG
DVLTLIEQAQ RTFEEEEVAK MASTLASDED FTLEDFLEQM MMIRKLGPIG KLLQMMPGMG
QMREQIENID ERELDRVAAI IRSMTPEERA NPKIINGSRR LRIAKGSGTQ VSDVSGLVTR
FFEAQKMLRQ LKQGGLPGMP GMPGFPGMPG MGPGRKKAAK AAGKKGKKNK QRSGNPLKAR
QQEAERAAQR ERKRAEEPAP PTLPPGLGAG MPQLPPAFGG GLPDLSALKP PKKKK
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