| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0617 |
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| Symbol | |
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| ID | 3581544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 716285 |
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| End bp | 717868 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684307 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_288678 |
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| Protein GI | 72161021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACG ACAGTTTCCA CGTATTCGAC ACGACCCTGC GTGACGGCGC TCAGCGCGAA
GGCATCAACT TCACCGTCGC CGACAAACTT GCGGTCGCGA AGCTGCTCGA CGAGTTCGGT
GTGGGTTTCA TCGAGGGCGG CTGGCCCGGC GCGAATCCGA AGGACACAGA ATTCTTCCGA
CGGGCCCAAA CAGAACTGTC CCTCAAACAT GCGCAGCTCA CCGCGTTCGG CTCGACCCGG
CGGGCGGGAA CCACGGCTGC GAAGGACCCC CAGGTGCTCG CGTTGCGCGA CTCCGGGGCG
CCCGTCGTCA CCCTCGTGGC GAAGAGCGAC GACCGGCACG TCGAACTGGC GCTGCGCACC
ACGCTCGAGG AGAACCTCGA GATGATCGCG GACACGGTCT CCTTCCTGCT GGGCCAGGGA
CAGCGCGTCT TCGTTGACTG CGAGCACTTC TTTGACGGGT ACCGGCACAA CCCCGAATAC
GCACTCCGTG TGGTGCGCAC CGCGGCCGAG GCGGGGGCCT CCGTGGTGGT GCTGTGCGAC
ACCAACGGCG GCATGCTGCC GTCCGACGTC TTCCAGATCG TCAGCGAAGT CCGCGAAGCC
ACCGGGGCCC GGCTGGGCAT CCACGCCCAG GACGACTCGG GGTGCGCCGT GGCCAACACG
CTGGCCGCGG TCGACGCGGG CGCCACCCAC GTCCAGTGCA CCGCCAACGG GTACGGGGAG
CGGGTCGGCA ACGCCAACCT GTTCTCGGTC GTCCCCGCCT TGGTGCTCAA ACGCGGCCGC
AATGTGCTGC CCGAAGGCTG CCTGCGCGAG ATGACCCGGG TGTCCCAGGC TATCGCCGAG
ATCGCGAACA TCGCTCCAGC CACCCACCAG CCCTACGTCG GCATCTCCGC CTTCGCCCAC
AAGGCCGGGC TGCACGCTTC TGCGATCAAG GTGGACCCGG ACCTCTACCA GCACATCGAC
CCGGCGCTGG TCGGCAACGA CATGCGCATG CTGGTCTCCG ACATGGCCGG GCGGGCCTCG
GTGGAGCTGA AGGCGAAAGA GCTCGGCGTG GACTTGTCCG GCGACCGCGA GACCCTGGGC
CGGATCGTGG AGCGGGTCAA GGACATGGAG ATGGCCGGGT ACAGCTTCGA AGCGGCCGAC
GCCTCCTTGG AGCTGCTGCT GCGCGAAGAG ATCGGCCAGC CGGTGCGGTA CTTCGAAGTG
GAGTCGTGGC GCACTATCTC CGAGCGGCGC CCCGACGGGT CCAGCGCCAG CGAGGCCACG
GTGAAGCTCT ACGTCAAGGG TGAGCGGGTG GTGGCAACCG GGGAAGGCAA CGGTCCGGTC
AACGCCCTGG ACCGGGCACT GCGCTCGGCG CTGGAGAGCG TCTACCCCGA CCTGGCCACG
ATGGAACTAG TCGACTACAA GGTCCGCATC CTGGAGGGCA CGTCCGGAAC GGACGCGGTC
ACCCGGGTGC TCATCGACTG CAGTGACGGG CAGGGCGAGT GGACGACGGT CGGAGTGGGT
GAGAACGTCA TCGAGGCGTC GTGGACGGCG CTGGAGCAGG CCCTCACCTA CGGGCTGCTG
CGCCGCGGCT ACACCCAGCA GTGA
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| Protein sequence | MLDDSFHVFD TTLRDGAQRE GINFTVADKL AVAKLLDEFG VGFIEGGWPG ANPKDTEFFR
RAQTELSLKH AQLTAFGSTR RAGTTAAKDP QVLALRDSGA PVVTLVAKSD DRHVELALRT
TLEENLEMIA DTVSFLLGQG QRVFVDCEHF FDGYRHNPEY ALRVVRTAAE AGASVVVLCD
TNGGMLPSDV FQIVSEVREA TGARLGIHAQ DDSGCAVANT LAAVDAGATH VQCTANGYGE
RVGNANLFSV VPALVLKRGR NVLPEGCLRE MTRVSQAIAE IANIAPATHQ PYVGISAFAH
KAGLHASAIK VDPDLYQHID PALVGNDMRM LVSDMAGRAS VELKAKELGV DLSGDRETLG
RIVERVKDME MAGYSFEAAD ASLELLLREE IGQPVRYFEV ESWRTISERR PDGSSASEAT
VKLYVKGERV VATGEGNGPV NALDRALRSA LESVYPDLAT MELVDYKVRI LEGTSGTDAV
TRVLIDCSDG QGEWTTVGVG ENVIEASWTA LEQALTYGLL RRGYTQQ
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