| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0566 |
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| Symbol | kgd |
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| ID | 3581264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 640446 |
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| End bp | 644090 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684256 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_288627 |
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| Protein GI | 72160970 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.622687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTCTG AGGCGTCTCA ACCCCTGACA GATTTCGGCC CCAACGAGTG GCTGGTCGAC
GAGCTTCACC GAAAGTACCT CGCCGATCCC AACTCAGTTG ATAAGGCATG GTGGAATTTC
TTCGCGGACT ACAAGTCCGG AACCGCCGCC GACGGGTCAA CCTCCCCTGC TAAGAGCACC
GTAGCCGGCA ACGGTGCTGG CGGCGCGGTC AGAGCCGCGG CATCGAAGGC GGCCGCCCGG
CCCGCCACAG CCACCACCCC CGACGGCTCT GACGATGCAC TCGCGGTGTC CCAGGAACGG
CTGCGTGGTG CATCGGCCCG TACCGCCGCG AACATGGAGT CCAGCCTCAC CCTGCCTACC
GCCACAAGCG TGCGCGCGGT GCCGGTGAAA CTCCTGTTCG ACAACCGCAT CGTGATCAAC
AACCACCTGC GGCGCGCACG GGGAGGCAAA GTCTCCTTCA CCCACCTGAT CGGCTACGCC
ATGGTCAAGG CGCTGGAGTC GGTCCCGGTG ATGAACTACT CCTACACCGA GATCGACGGC
AAGCCCGCCG TGGCCAAGCC CAAGCACGTC AACTTCGGGC TGGCGATCGA CCTCGCCAAA
CCGGACGGCT CCCGGCAGCT TGTGGTGCCG AACATCAAAG CTGCCGACAC CATGAACTTC
AAGGAGTTCT GGTCCGCCTG CGAGGAGCTT GTCCGCAAGG CGCGCAGCAA CAAGCTGACC
GTGGCCGACT TCCAGGGCAC CACTATCACC CTGACCAACC CGGGCGGTAT CGGCACGGTG
CACTCGGTGC CGCGGCTGAT GCCGGGCCAG GGCACCATCC TGGGCGTGGG TGCTATGGAG
TACCCGGCCG AGTTCCAGGG CGCTTCTCCG GCGACCTTGA ACGAGCTCGC CGTCAGCAAG
GTCATGACTC TGACCTCCAC CTACGACCAC CGCATCATCC AGGGGGCGGA GTCCGGAGAG
TTCCTGCGGC GGATCCACCA GCTGCTGCTC GGCGAGGACG GCTTCTACGA CGAGATCTTC
GAGTCGCTGC GCATCCCCTA CGAGCCGGTC CGCTGGGTGC AGGACATCTC GGTTAACCGG
GACAACCAGC TTGACAAGGC CACCCGCGTC CAGGAGCTCA TCCACGCCTA CCGGGTGCGC
GGCCACCTGA TGGCCGACAC GGACCCGCTG GAGTACAAGC AGCGCCGCCA CCCCGACCTG
GACGTCCTCG AGCACGGCCT CACCCTGTGG GACCTGGACC GCGAGTTCCC CACCGGAGGC
TTCGGCGGCA AGCCGGTGAT GAAGCTCCGC GAGATCCTGG GGATCCTGCG GGACAGCTAC
TGCCGCACCG TGGGCATTGA GTACATGCAC ATCCAAAGCC CTGAGGAGCG GGAGTGGATC
CAGGCCCGGG TGGAGCGGGA GCCGGAGAAG CTCAGCCGGG AAGAGCAACT GCACATCCTG
AAGCTGCTCA ACAGCGCTGA GGCGTTCGAG ACCTTCCTGC AGACCAAGTA CGTGGGCCAG
AAGCGCTTCT CCCTGGAGGG CGGAGAATCG CTGATCCCGC TGCTGGACGG GGTGATCACC
AAGGCGGCTC GAGCCCAGTT GGACGAGGTC GTCATCGGTA TGGCCCACCG CGGCCGCCTC
AACGTGCTGG CCAACATCTG CGGCAAGTCC TACGCGCAGA TCTTCGGCGA GTTCGAAGGC
AACCTCGACC CGCGCAGCGC CCACGGTTCG GGTGACGTCA AGTACCACCT CGGTACCGAG
GGCACCTTCA CCACGATCAC CGGCGAGAAG ATCGCGATCA GCCTGGCGGC CAACCCGAGC
CACCTGGAGA CGGTCAACCC GGTCGCCGAA GGTATCGTGC GGGCCAAGCA GGACATCCTC
AACAAGGGGG CCACGGGCTT CACGGTCCTG CCGATCCTGA TCCACGGCGA CGCCGCGTTC
GCGGGCCAGG GTGTGGTCGC CGAGACCCTC AACCTGTCGC AGCTCCGCGG CTACCGCACC
GGCGGCACCA TCCACATCAT CGTCAACAAC CAGGTCGGGT TCACGACCTC GCCCAAGGAC
AGCCGCTCCA GCGTGTACGC GACGGACGTG GCCCGCATGG TGCAGGCGCC GATCTTCCAC
GTCAACGGGG ACGACCCGGA GGCTGTGGTG CGGGTGGCAC GGCTGGCGTT CGCCTACCGC
CAGGAGTTCA ACAAGGATGT CGTCATCGAC CTGGTCTGCT ACCGGCGGCG CGGGCACAAC
GAGGCGGACA ACCCCTCGTT CACCCAGCCG CTGATGTACG ACATCATCGA CGCCAAGCGG
TCCACCCGGA AGCTGTACAC CGAGGCGCTG ATCGGCCGCG GCGACATCAC GCTGGAGGAG
GCCGAGGAGG CGCTGCGCGA CTACCAGGAG CAGTTGGAGC GCGCTTTCGC CGAGACCCGC
GAGGCCGCCA AGAAGCCGAT CGAACCGGGT TCGGTCATCA AGCCCGAGGT GTTCACCGAG
GCCCCGATCG ACCACTCCGC GACCCCGACC GCGGTCAGCG AAGAGGTCAT CAAGCGGGTG
GCAGAGACCC AGGTCACGTT CCCCGAGGGC TTCACCGTGC ATCCGCGGCT GCTGCCGCAA
CTGCAGCGGC GGGTCCGCAT GGTCGAGGAG AACGCGATCG ACTGGGCGAT GGCCGAGACG
CTGGCGTTCG GTTCGCTGCT GATCGACGGC CACCCGGTGC GCCTGGTCGG CCAGGACAGC
CGCCGCGGTA CGTTCGGCCA GCGGCACGCC GTCCTCGTGG ACCGCAAGAC GGGCGAGGAG
TACACCCCGC TCAAGGTCTT CGACCGGGGC ACCGCCAAGT TCCACGTGCA CGACTCGCTG
CTGAGCGAGT ACGCGGCCCT GGGCTTCGAG TACGGCTACT CCTTGGAGCG TCCGGACGCC
CTGGTGGCCT GGGAGGCCCA GTTCGGTGAC TTCGTCAACG GCGCCCAGAC CGTCATCGAC
GAGTACATCA GCTCGGGCGA GCAGAAGTGG GGCCAGAAGT CGAGCGTGAC CCTGCTGCTG
CCGCACGGCT ACGAGGGCCA GGGGCCGGAC CACTCCTCGG CGCGCATCGA GCGTTTCCTG
CAACTGTGCG CGCAGGAGAA CATGACGGTC ACCATCCCGA CCACGCCGGC GAACTACTTC
CACTTGCTGC GCTGGCAGGT GAAGTCGCCG TACCGGCGCC CGCTGATCGT GTTCACGCCC
AAGTCGATGC TGCGGCACAA GGCGGCCGTG TCGGCGGTGT CGGAGTTCAC CTCCGGATCG
TTCCGTCCGC TCATCCCGGA CACCAGCGGC ATCGCTCCGG AGGACGTGCG GCGGGTGATC
CTGTGCGCGG GCAAGATCTA CTACGAGCTG GACGCGGCCC GGAAGCGGAC CGGTGACCAG
CACACCGCGA TCATCCGGGT GGAGCGGCTC TACCCGCTGC CGATCGACGA GATCCGCCAG
CAGCTCCGGT CGTTCCCCAA CGCGGGCGAG GTGCTGTGGG TGCAGGAGGA GCCGGCGAAC
ATGGGGCCGT GGCCGTTTGT GGCGCTGGTC TTCGCCGAGC AGCTCGACCG TCCGTTCACC
CGGATCTCGC GTTCGGCGAG CTCCTCTCCT GCCACGGGTT CCGCCAAGCG GCACGAGGTG
GAGCAGCAGG CCCTGGTGAA CACGGTCTTC CCGCCGACCG AGTAG
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| Protein sequence | MSSEASQPLT DFGPNEWLVD ELHRKYLADP NSVDKAWWNF FADYKSGTAA DGSTSPAKST
VAGNGAGGAV RAAASKAAAR PATATTPDGS DDALAVSQER LRGASARTAA NMESSLTLPT
ATSVRAVPVK LLFDNRIVIN NHLRRARGGK VSFTHLIGYA MVKALESVPV MNYSYTEIDG
KPAVAKPKHV NFGLAIDLAK PDGSRQLVVP NIKAADTMNF KEFWSACEEL VRKARSNKLT
VADFQGTTIT LTNPGGIGTV HSVPRLMPGQ GTILGVGAME YPAEFQGASP ATLNELAVSK
VMTLTSTYDH RIIQGAESGE FLRRIHQLLL GEDGFYDEIF ESLRIPYEPV RWVQDISVNR
DNQLDKATRV QELIHAYRVR GHLMADTDPL EYKQRRHPDL DVLEHGLTLW DLDREFPTGG
FGGKPVMKLR EILGILRDSY CRTVGIEYMH IQSPEEREWI QARVEREPEK LSREEQLHIL
KLLNSAEAFE TFLQTKYVGQ KRFSLEGGES LIPLLDGVIT KAARAQLDEV VIGMAHRGRL
NVLANICGKS YAQIFGEFEG NLDPRSAHGS GDVKYHLGTE GTFTTITGEK IAISLAANPS
HLETVNPVAE GIVRAKQDIL NKGATGFTVL PILIHGDAAF AGQGVVAETL NLSQLRGYRT
GGTIHIIVNN QVGFTTSPKD SRSSVYATDV ARMVQAPIFH VNGDDPEAVV RVARLAFAYR
QEFNKDVVID LVCYRRRGHN EADNPSFTQP LMYDIIDAKR STRKLYTEAL IGRGDITLEE
AEEALRDYQE QLERAFAETR EAAKKPIEPG SVIKPEVFTE APIDHSATPT AVSEEVIKRV
AETQVTFPEG FTVHPRLLPQ LQRRVRMVEE NAIDWAMAET LAFGSLLIDG HPVRLVGQDS
RRGTFGQRHA VLVDRKTGEE YTPLKVFDRG TAKFHVHDSL LSEYAALGFE YGYSLERPDA
LVAWEAQFGD FVNGAQTVID EYISSGEQKW GQKSSVTLLL PHGYEGQGPD HSSARIERFL
QLCAQENMTV TIPTTPANYF HLLRWQVKSP YRRPLIVFTP KSMLRHKAAV SAVSEFTSGS
FRPLIPDTSG IAPEDVRRVI LCAGKIYYEL DAARKRTGDQ HTAIIRVERL YPLPIDEIRQ
QLRSFPNAGE VLWVQEEPAN MGPWPFVALV FAEQLDRPFT RISRSASSSP ATGSAKRHEV
EQQALVNTVF PPTE
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