| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0550 |
|---|
| Symbol | |
|---|
| ID | 3580425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 624859 |
|---|
| End bp | 626388 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637684240 |
|---|
| Product | metal-dependent phosphohydrolase, HD region |
|---|
| Protein accession | YP_288611 |
|---|
| Protein GI | 72160954 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTACCAC GGTTACCGGA TGGACCTGGT GGTAGATCCG GATCTCTGCA ACCATGGCGG
AATGGTCGGC TGCAGAACGA CGAGAAGGAG CGGGAATTGC GTGCCCTACC CGTGGCTGCG
CGGTTGTACG TGGGTCTTGT CGCGCTCGGT GCCGCCACCG CCATACTCCT GGGAGTGTTC
CTCGGACCTA TCACCGAGGT TGACCTAGGA ACCCTCCTGC TTCTCGCGAT CCTGTTCGTG
ATCGCGGAAT CCATTGCCAC GATGGTCGAC AGCGGCAAGA CGGGGATTTC GCCGGCCTCG
GCGGCCTCGC TTGCCGCTGT TGTCCTGGTG GGGCCGGTGG GCGCCGCCAT CGTCGGTATC
GCCTCAGGGC TGGTCATCCG AAGACAGAAC CTCGTCAAGC GGCTCTTCAA CGGAGCACAG
TTCGTCATCG CCGGATACGC CTCGGGAACA GTGTTCCAAC TGCTGGGCGG AAGGATGGGC
GTCCCGGAAC CGGAGATGTT CCCGTGGATC CTCCTGCCCT TCACCGGTGC GGTACTGACG
TTCTCGCTAT GCAACACCCT GCTGATGGCC GGGCTGATGT GGTCGCTGGG GGAGCTGCGG
CTGAAGCGCC CCCGCCACAT GCGGTGGCGG CCGCTGGCCA CCCTGGAGCT CTCCTCGATC
GGCTACGCCA TGCTCGGCCT GTTCATCGCC GCGATCTGGG GAGCGGTCGG CCCCTTCGCC
GTGCTCCTCG TCCTGCTCCC GTTGTTCATC GCCCGCTGGG CGTTCGACCA GTACGTCTTC
CAACAGCGCG CCCATGAAGC CACCCTGGCC ACGCTCTGCC AGGCCGTGGA GACGAAGGAC
TACTACACCC GCGGACACTG CATGCGCGTG GCGAAGGCCG CCGCCATGAT CGCGGAGGAG
CTCGGCATGT CGGCCGAGCG CGTCCAGACG ATGCGCTACG CAGGCATGCT CCACGACATC
GGCAAACTCG GCGTCCCCAC CAAAATCCTG CAGAAGGCCG GAAAACTCAC CGAGGAGGAG
TACGCGGCGA TCCAATTGCA CCCCATGCGC GGCTACGAGA TCGTGCGCGA GATCGACTTC
CTCGACGAGG CGCTCGCCGG CATCCTGCAC CACCATGAAC GCATAGACGG CGGAGGCTAC
CCCAAAGGCC TGGCGGGCGA GGACATCCCC GAGGCGGCCC GACTGGTCTC GGTGGCCGAC
GTCTTCGACT GTTTGACGTC CACCCGCTCG TACCGGAAGG CGTGGAGCAC GGAAGCCGCC
ATCGCAGAGC TGCGCCGGTG CGCCGGCACC CAGTTCGACC CCCGGATGGT GGAGGCACTG
GTCCGCGCCG TGGAACGCGA AGGCTGGGAG GTTCCCGACC TGGTCGAGCC GGTCGAGGAC
GCGTGCGAAC CCTGCACCGC CCAGCCGGTC GGCGCCTCCG AAGCCGCCCC TGAAACAGTC
CCGACAGGGG CTGCGCAAAC CGCCGCAGAC GGTGATACTC AGACCGACAC TAACCTCACG
GTCGGAGTCG TGGAAGAGAC AACCGGATGA
|
|---|
| Protein sequence | MLPRLPDGPG GRSGSLQPWR NGRLQNDEKE RELRALPVAA RLYVGLVALG AATAILLGVF
LGPITEVDLG TLLLLAILFV IAESIATMVD SGKTGISPAS AASLAAVVLV GPVGAAIVGI
ASGLVIRRQN LVKRLFNGAQ FVIAGYASGT VFQLLGGRMG VPEPEMFPWI LLPFTGAVLT
FSLCNTLLMA GLMWSLGELR LKRPRHMRWR PLATLELSSI GYAMLGLFIA AIWGAVGPFA
VLLVLLPLFI ARWAFDQYVF QQRAHEATLA TLCQAVETKD YYTRGHCMRV AKAAAMIAEE
LGMSAERVQT MRYAGMLHDI GKLGVPTKIL QKAGKLTEEE YAAIQLHPMR GYEIVREIDF
LDEALAGILH HHERIDGGGY PKGLAGEDIP EAARLVSVAD VFDCLTSTRS YRKAWSTEAA
IAELRRCAGT QFDPRMVEAL VRAVEREGWE VPDLVEPVED ACEPCTAQPV GASEAAPETV
PTGAAQTAAD GDTQTDTNLT VGVVEETTG
|
|---|
| |