| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0524 |
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| Symbol | |
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| ID | 3578990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 592553 |
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| End bp | 595879 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684212 |
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| Product | putative DNA helicase |
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| Protein accession | YP_288585 |
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| Protein GI | 72160928 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.98499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG TCTACGGACC CGCACAGCTC GCGCGCCTGC TCGGACTGCC TGAACCCACT
CCTGAGCAGG CAGCGGTCAT CGCCGCACCC TTACGCCCCG GCCTCGTCGT CGCCGGGGCC
GGTTCCGGGA AGAGCGAGAC GATGGCTGCC CGGGTGGTGT GGCTGGTCGC CAACGGCCAC
GTACGCCCCG AACAGGTCCT CGGCCTCACC TTCACCCGGA AAGCCGCTGC CGAGCTCGCG
GAACGCGTGC GGAAACGGCT CGATCAACTG CGGGGCGCGG GCGTCGTCCC CGACGACGTC
CTCGACGGGG AGCCCACCGT TGCGACCTAC AACGCGTATG CGACCCGCCT GGTCGGCGAC
CACGCGCTGC GGGAAGCGAT CGAACCGACG ACCCGCATCA TCACCCCGGC GATCGCCTGG
CAGTTCGTCC ACCGGGTGGT CAGCACCTAT GACGGGCCGA TGGACGCGGT CACCTCTGCT
CCCGCCACCG TGGTGCATGA CGTCCTCGCC CTCGCCCAGG AACTCGCCGA GCACCTGTGC
ACCCCCGACG ACGTACGCGC CTACGGGGAC TGGCTCCGCG AACGCGCCGC CCAGTTGAAG
AAAACCCCTG CCCTGGTGCG CGACCTGCTG GCTGTCCAAC GCCACCGCGA GCAGCTCCTG
CCGCTGCTGG AGCAGTTCGC CCAGCTCAAA GCGGAACGCG AAGTGATGGA CTACAGCGAC
CAGGTCGCGC TGGCCGCGCG TATCGCGCAA CGCCACCCCG AGGTGGGCCG GATCGAACGC
GAACGCTACG CCGTGGTCCT GCTCGACGAA TACCAGGACA CCAGCCACGC CCAACTGGTG
CTGCTGCAGT CCCTGTTCGG CAACGGCCAC CCGGTCACCG CGGTCGGCGA CCCCTGCCAG
TCCATCTACG GGTGGCGGGG CGCCAGCGCC GGCAACCTGT CGCGTTTCCC CGTCGACTTT
CCGGAGAAGC CGGACCGGCC GGCGCCCGTC CGCCAGCTGT CCACCAGCTT CCGCAACGGC
GAACGCATCC TGGAGGTCGC GAAACGTATC GCGGAGCCTT TGCGTGCCGC AGCCCGGGAT
GTGCCTGTGC TCTACCCGGG GCCTGCCCGG GCCGGGCGCG GCCGGGTGAC GTGCGCCCTG
CTGCGCACCG AAACCGAGGA AGCGGAGTGG ATCGCCGAGC AGATCGACCG GGCGCTGCGC
GAATCCGCGG AACACCACAC GGCGCCCGAC GGCCTGCCCT GGCCGGAACA GGAGCATCGG
GGGCCGCTCA GCTACGGGGA CATCGCCGTC CTGTGCCGGA AACGCGCCCA GTTCCCCGTG
ATCCGGCGCG CCCTAGAAGA ACGCGGCATC CCCGTCGAAG TCGTCGGACT GGGCGGGCTG
ATCGAAGTGC CGGAAGTCCG GGACATCGTC GCTACGCTGC GGGTGCTCCA CGACCCCACC
GCCGCGAACG AGCTCGCCCG GATCCTCACC GGGCCGCGCT GGCGGCTGGG CCCGCGCGAC
CTGGTCGCAC TCAACCAGCG CGCTAAAGAA CTCGCCGAGG AAGCCCGCCG GGACCTGCGC
GGGGAGGCCG CGGAAGCCCG CGTGGACGAG GAGGACCCGC TGCGGCAGAC CGTGCTCGAC
CTGACAGCGG AGGCCGGCAG TCTCCTTGAC GCCCTCGACG ATCTCGGCCC GCCGGAACGC
TACTCCGCGA CGGGGTACCA GCGGTTGCAG GCTCTCTCCG AAGAGCTCCG CACGCTGCGC
ACCCGCATCA GCCAGCCGCT GCCCGACCTG ATCATGGAAG TGGAGCGGGT GCTGGGGCTG
GACATCGAGG TGGGGGCGCG GCCGGGCCGC GACCAGAGTG CGGCCCGGGC CGACCTGGAC
GCGTTCGTGG ACGCCGCGGT GCGGTTCAGC GGTTCCACCG ATACGCCCAC GCTGAGCGCG
TTCCTCGCCT ACCTCACCTC TGCGGAGGAC ACCGAACACG GCTTGGAACC GGGGGAGCGC
GTCGGGTCCA GCAACACGGT CAAGCTCATG ACGGTGCACG CCGCGAAAGG CCTGCAGTGG
CCCATGGTGG TCATCCCCGG GCTGAGCCGC GGCCAGTTCC CCGGGGTTCC GAAGACCGTG
AAGGGCTGGA CCGGCAAGGC GGCGAGCCTG CCGTTCGCGT TGCGCGGGGA CCGGGACAGC
CTGCCCGAAC TGGCCGACGT GACGGTTCAG GAGATCAAGC AGTTCACCGC GGCAGAACGC
GCCCGGGAAC TGATGGAGCA GCGGCGGCTC GCCTACGTTG CGGTGACCCG GGCCGCGTTC
TCCTTGGTGT GCACCGGGCA CTGGTGGGGG CAGGAGACCC AGCGGAGCCG CGGACCGTCA
GAGTTCCTCG AAGAGATCCG CGAAGTGTGC GAGACGGGCG TGGGACAGGT CGCGCTGTGG
ACTGATCCGC CCGACGAGGG GGAGCCCAAC CCGCAGTTGG TGGCGGACAA CTCCGTGGTG
TGGCCGCCCC AGACCGACGA GCGCCGCGAC GCTGCCGAGC GTGCCGCCGC CTTGGTCGCC
CGGTACCGGA ACGGGGAGTG GGAGCGGGAG CTCGCCCTGA TGAACCGCGC TCTCCTGCGG
CCCGCAGCGA ACCGCAGGAT CCGCGACTGG GCGCGGGACG TGGAGCTCCT GTTGCGCCAC
CGCGACCAGG AGGAAGGCGC CCCCCGCGTT ATCGAGGTGG AACTCCCCGA CCACCTGACG
GTCTCCGCGC TAGTGTCGCT GGCCCGCGAT CCGGCCGCGC TCGCCCAGCA GATCCGCCGC
CCGCTGCCGC GCCCGCCCGC CCCGCACGCC CGCCGAGGAA CCGCTTTCCA CACCTGGTTG
GAGCGGCGTT TCGGCCAGGA GACGCTGATC GACCCGCACG AGCTTCCCGG GGCTGCGGAC
GAGACCGCAA CGGGCGACGC TGACCTGGAC GAACTCCAGC GCCAGTTTGA ACAGAGCGTG
TGGGCGGACC GGGTGCCGCT GGAAGTGGAG GTCCCCTTCG AGACCATCAT CGGCGACCGG
TTGGTGCGGG GCCGGATGGA CGCGGTCTTC CACGACCCTG AAGACGACGT CTACGAGGTA
GTGGACTGGA AGACCGGGCG GCTGCCCGCC ACGGAGCGGG AACGCCGTGC GGCGGCCGTG
CAGTTGGCGG CCTACCGGGT GGCCTGGGCG CGGATCGCGG ACATACCGCT GGAGCGGGTG
CGCGCCGCGT TCCACTACGT CCGCGCCAAT GTGACGGTCT ATCCCGAAGA CCTGCTGGAC
GCGGACGGCC TAGCCGCGCT CATCGCCGCG GTCCCGCAGC CGAGCGTCCC AGGGGAGGCC
GCTGAGGGGG CAACGGGCGA CCGGTGA
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| Protein sequence | MTDVYGPAQL ARLLGLPEPT PEQAAVIAAP LRPGLVVAGA GSGKSETMAA RVVWLVANGH
VRPEQVLGLT FTRKAAAELA ERVRKRLDQL RGAGVVPDDV LDGEPTVATY NAYATRLVGD
HALREAIEPT TRIITPAIAW QFVHRVVSTY DGPMDAVTSA PATVVHDVLA LAQELAEHLC
TPDDVRAYGD WLRERAAQLK KTPALVRDLL AVQRHREQLL PLLEQFAQLK AEREVMDYSD
QVALAARIAQ RHPEVGRIER ERYAVVLLDE YQDTSHAQLV LLQSLFGNGH PVTAVGDPCQ
SIYGWRGASA GNLSRFPVDF PEKPDRPAPV RQLSTSFRNG ERILEVAKRI AEPLRAAARD
VPVLYPGPAR AGRGRVTCAL LRTETEEAEW IAEQIDRALR ESAEHHTAPD GLPWPEQEHR
GPLSYGDIAV LCRKRAQFPV IRRALEERGI PVEVVGLGGL IEVPEVRDIV ATLRVLHDPT
AANELARILT GPRWRLGPRD LVALNQRAKE LAEEARRDLR GEAAEARVDE EDPLRQTVLD
LTAEAGSLLD ALDDLGPPER YSATGYQRLQ ALSEELRTLR TRISQPLPDL IMEVERVLGL
DIEVGARPGR DQSAARADLD AFVDAAVRFS GSTDTPTLSA FLAYLTSAED TEHGLEPGER
VGSSNTVKLM TVHAAKGLQW PMVVIPGLSR GQFPGVPKTV KGWTGKAASL PFALRGDRDS
LPELADVTVQ EIKQFTAAER ARELMEQRRL AYVAVTRAAF SLVCTGHWWG QETQRSRGPS
EFLEEIREVC ETGVGQVALW TDPPDEGEPN PQLVADNSVV WPPQTDERRD AAERAAALVA
RYRNGEWERE LALMNRALLR PAANRRIRDW ARDVELLLRH RDQEEGAPRV IEVELPDHLT
VSALVSLARD PAALAQQIRR PLPRPPAPHA RRGTAFHTWL ERRFGQETLI DPHELPGAAD
ETATGDADLD ELQRQFEQSV WADRVPLEVE VPFETIIGDR LVRGRMDAVF HDPEDDVYEV
VDWKTGRLPA TERERRAAAV QLAAYRVAWA RIADIPLERV RAAFHYVRAN VTVYPEDLLD
ADGLAALIAA VPQPSVPGEA AEGATGDR
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