| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0480 |
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| Symbol | |
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| ID | 3579622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 546351 |
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| End bp | 547523 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637684168 |
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| Product | cell wall-associated hydrolase (invasion-associated proteins) |
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| Protein accession | YP_288541 |
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| Protein GI | 72160884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGGC TGTTCGTCCG CGTACCTCCG TCTGACGACG GCAACTGCGC GACCCAATTT
GCGATCGGTG TCGGCCTGTT CATCGCGGGC GTGGTGACCA TCGCAATGGT CGTCATTCCG
TTGGCCACGG TCAATCAAAG CGTCGCCAAC CTCACCTCTG GGGCACTGAA ATGCACCAGT
GAGACCGAAC AGGTGGAAGC CTCCGGGTAC GCCGAGAACT CCATCCCGGA AAACTACCTG
GAGATCTACC AGAGGGTCGG GGAGGAAAAA GGGATCCCGT GGAACGTGCT GGCTGGGATC
GGCCAGGTGG AAAGCCACCA CGGTCGTTGG GACGGACCGG GTATCACGGA AGGACACAAC
GACTGGGGTG CGGCCGGACC GATGCAGTTC GGTGCTCTGG ACGGGTCTGC GGCAGGCAAT
AGCTGGGGTG GAGAACCGAT CATGCCTGTC GAGGACCGTC CAGAGGAAGG CTACGGCCAG
GACGGTAACG GCGACGGCAT CGTGAACGTG TACGACCCAG AGGATGCCAT TCCCGCCGCA
GCCGACTATC TGCTCGACCA CGGTGCCAAG GAGGACATCC GCCAGGCGAT CTACGCCTAC
AACCACGCCT GGTGGTATGT CGACGAGGTT TTGGAGTGGG CGGAGAAGTA CGCGGAAGGC
TCGTACACGG CGAGCGCGTC CATCGCTACC GCGGTGAACT GCACGCTGAC CGCTGACGGT
AACTTCATCG GCAGCGCTCC GGACGATCTG GTCCAAGCGG TGGTGGATTG GGCACTGGCC
CAGCGAGGCA AACCCTATGT GTGGGGTGGT ACAGGGCCGA ACGGTTTTGA CTGCTCGGGG
CTAGTCATGC GGGCCTACGA GAGCATCGGA GTCACGATTC CCCGCATCTC TCAGGACCAA
TGGAATTTCG GCCCTCGCAT TCCCAAGGGA CAGGAACAGC CAGGAGACCT GGTCTTCTTC
GACGTGCAGC GGCCAGGAGA ACCCCCAGGG CCAGGACATG TCGGCATGGT GATCGGGGAC
GGCCTGATGG TTGAAGCCTG GTGCACCAAC TGTGGGCCGA TCGCGGTACG CGAATACGAC
AGCCCTAACC GAGCGCCGAT CATGGGATTC ACTAGGCCGT TGGAGGCTCC GGAAGCGAAG
GCACAGTTGG CTCAGTTGGA GAACCGTGGG TAA
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| Protein sequence | MLRLFVRVPP SDDGNCATQF AIGVGLFIAG VVTIAMVVIP LATVNQSVAN LTSGALKCTS
ETEQVEASGY AENSIPENYL EIYQRVGEEK GIPWNVLAGI GQVESHHGRW DGPGITEGHN
DWGAAGPMQF GALDGSAAGN SWGGEPIMPV EDRPEEGYGQ DGNGDGIVNV YDPEDAIPAA
ADYLLDHGAK EDIRQAIYAY NHAWWYVDEV LEWAEKYAEG SYTASASIAT AVNCTLTADG
NFIGSAPDDL VQAVVDWALA QRGKPYVWGG TGPNGFDCSG LVMRAYESIG VTIPRISQDQ
WNFGPRIPKG QEQPGDLVFF DVQRPGEPPG PGHVGMVIGD GLMVEAWCTN CGPIAVREYD
SPNRAPIMGF TRPLEAPEAK AQLAQLENRG
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