| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0471 |
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| Symbol | ispH |
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| ID | 3579613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 532475 |
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| End bp | 533476 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684159 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_288532 |
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| Protein GI | 72160875 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA CGAATCGCCG CCGTGTTCTC CTCGCCAAAC CCCGCGGTTA CTGCGCCGGG
GTGGACCGCG CCATCCACAC CGTCGAAAAG GCCCTCGAAC AGTACGGGCC CCCCATCTAC
GTGCGTAAGC AGATCGTGCA CAACACGCAT GTGGTGCGCA CCCTCGAGGA GCGCGGTGTC
ATCTTCGTCG AGGAGACCTC CGAAGTGCCG GAAGGCGCCA CCGTGGTCTT CTCCGCCCAC
GGCGTCTCCC CCCAGGTGCA CAAGGAGGCG GCGGAACGCA AGCTGCGGAC TATCGACGCG
GCCTGCCCGC TTGTCACTAA AGTCCACAAG GAAGCCCAGC GGTTCGCCGC CGAGGACCTC
GACATCATTC TCATTGGGCA CGAGGGGCAC GAAGAGGTCG AGGGCACGAG CGGCCACGCT
CCCGAGCACA TCCAGATCGT CGACAGCCCG GAAGAGGTCG CCAACATCAA GGTCCGCGAC
CCCAACCGGG TGGCGTGGCT GTCGCAGACC ACCCTGTCGG TGGATGAGAC TAACGCCACA
GTTCAGGCGC TGCGGGAACG CTTCCCCAAC CTCATCGACC CGCCCAGCGA CGACATCTGC
TACGCCACGT CGAACCGTCA GGCCGCGGTC AAGGCGATCG CTCCGCAGTG CGACCTGTTC
ATCGTGGTGG GCTCGTCCAA CTCCTCCAAC TCGGTCCGCC TGGTGGAAGT GGCCCGCGAC
GCGGGCGCCC GCGCCTCCTA CCTGGTGGAC AACGCCACCT ATCTGAAGGA GGAGTGGCTG
GAAGGCGTGA CCACTATCGG GGTCAGCAGC GGCGCGTCGG TGCCGGAGAT CCTGGTGCGG
GAGCTGCTGG AGCGGCTCGC CACCTACGGT TTCACCGACG TGGAGGAAGT GGAGACCGAG
CGGGAGAAGA TAACGTTCGC TCTGCCCCGG GAACTGCGGA CCCGGCGGTC GAAGAACGAC
AAGTCCCTGG TCGGCAAGCC GCTCCCCGTC TCCCCGGCCT GA
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| Protein sequence | MTATNRRRVL LAKPRGYCAG VDRAIHTVEK ALEQYGPPIY VRKQIVHNTH VVRTLEERGV
IFVEETSEVP EGATVVFSAH GVSPQVHKEA AERKLRTIDA ACPLVTKVHK EAQRFAAEDL
DIILIGHEGH EEVEGTSGHA PEHIQIVDSP EEVANIKVRD PNRVAWLSQT TLSVDETNAT
VQALRERFPN LIDPPSDDIC YATSNRQAAV KAIAPQCDLF IVVGSSNSSN SVRLVEVARD
AGARASYLVD NATYLKEEWL EGVTTIGVSS GASVPEILVR ELLERLATYG FTDVEEVETE
REKITFALPR ELRTRRSKND KSLVGKPLPV SPA
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