Gene Tfu_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0446 
Symbol 
ID3579837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp506300 
End bp506884 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID637684134 
Producthypothetical protein 
Protein accessionYP_288507 
Protein GI72160850 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACC CGCACCCGTC GCCCGCTCAA CCCCCGTCGC CCTACCTGGG GCCTCCCCCG 
CCCCCGGGGC CTTTCCCGCA CGGGGCCTAC CCGCCTCCGC CCGGCGTGTT CCCGCAGCCG 
CCCGAGGTTG CCAGTTGGGG ACGGCGGGTC GCCGCTTTCC TCATCGACTC GGTCCTCGCG 
CAGGTGCTCA CTTTCGGGGT GATCCTTATC GGCGCCCTAG TCGCCGCACT GGTGGACAAC 
ATCGCCTATC CCGAATACAT CCACTCGGAC ACGATGAGCC CTGCCGCGAT CACCATCGTG 
CTCACGGCGC TGTTCGCCGC GTTCGCCACC GCCATCGCCT ACTGGTCGCT GCCGCACGCC 
AAGTGGGGAA AGACCATCGG CAAGTGGATG CTCGGCATCC GGGTGATCGC CGCGAACACG 
GGGACGCCCC CGTCCGTGGG CCGCGCGCTG GGGCGCTACT TCTTCTTCGC GCTGCTCTCG 
TTCCCCATGA TCACGTTCTT CGTCGACTGC CTGTGGCCGC TGTGGGACTC CCGGGGACAG 
TCCCTCCACG ACAAGGTCGC CGGAACCTAC GTCATCCGCG GCTAG
 
Protein sequence
MTHPHPSPAQ PPSPYLGPPP PPGPFPHGAY PPPPGVFPQP PEVASWGRRV AAFLIDSVLA 
QVLTFGVILI GALVAALVDN IAYPEYIHSD TMSPAAITIV LTALFAAFAT AIAYWSLPHA 
KWGKTIGKWM LGIRVIAANT GTPPSVGRAL GRYFFFALLS FPMITFFVDC LWPLWDSRGQ 
SLHDKVAGTY VIRG