Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0415 |
Symbol | |
ID | 3579939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 467669 |
End bp | 468637 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637684102 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_288476 |
Protein GI | 72160819 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00469729 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGCA TGAAAGCCGC GGGTCAAAAA AAACTCATGC TCTTCTCGGG ACGGACCCAC CCCGATCTCG CGGCGGAGGT CGCGGTGGAA CTGGGTATCG AAACGGTTCC CACCAGGTTC CAGGACTTCG CCAACGGGGA GATCTTCGTC CGCTACCTGG AGTCGGTCCG AGGGTGTGAC GCTTTCGTCA TCCAGTGCCA CTCCGATCCG ATCAACAAGT CCATCATGGA GCAGTTGATC ATGGTGGACG CGCTGAAGCG GGCGTCAGCG AAACGCATCA CCGTAGTGAC GCCGTTCTTC GGCTACGCGC GCCAGGACAA GAAGCACCGG GGGCGGGAGC CGATCTCGGC GCGGTTGATC ACGGACCTGT TCAAAGCCGC CGGGGCGGAC CGGTTGATGG CGGTGGACCT CCACACCGAC CAGATCCAGG GCTTCTTCGA CGGCCCGGTC GACCACCTGT TCGCCCTTCC CCTCCTCGCC GACTATGTGG CGGCCAACGT GGACCTGAGC AACACCACCG TGGTGTCGCC GGACTCGGGG CGTGTGCGCA CCGCAGACCG GTGGGCCGAC CGGCTGGGTA CGCCGCTGGC GATCGTCCAC AAGCGGCGCG ACCCGGACGT GGCGCACGAG GTGCGGGTCC ACGAAGTCGT CGGTGAGGTG CGGGGCCGGA CCTGTGTCCT GGTGGACGAC ATGATCGACA CCGCGGGCAC CATCGTGAAG GCCGCGGACG CCTTGTTCGA GCAGGGGGCA GCCAAGGTGA TCGCGGTCGC GACGCACGGT GTGCTGTCGG GGCCCGCCGT GGACCGGCTC AAGGACTCGC GGATTTCCGA GGTCGTCATC ACCAACTCGC TGCCGGTGTC GAAGGACCGG CAGTTCGACA AGCTGACCCA GCTATCGATC GCTCCACTGC TGGCTCGGGC GATCAACGAG GTGTTCAGCG ACGGTTCAGT GACGAGCCTG TTCGAGTGA
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Protein sequence | MTGMKAAGQK KLMLFSGRTH PDLAAEVAVE LGIETVPTRF QDFANGEIFV RYLESVRGCD AFVIQCHSDP INKSIMEQLI MVDALKRASA KRITVVTPFF GYARQDKKHR GREPISARLI TDLFKAAGAD RLMAVDLHTD QIQGFFDGPV DHLFALPLLA DYVAANVDLS NTTVVSPDSG RVRTADRWAD RLGTPLAIVH KRRDPDVAHE VRVHEVVGEV RGRTCVLVDD MIDTAGTIVK AADALFEQGA AKVIAVATHG VLSGPAVDRL KDSRISEVVI TNSLPVSKDR QFDKLTQLSI APLLARAINE VFSDGSVTSL FE
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