Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0329 |
Symbol | |
ID | 3579810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 370304 |
End bp | 371611 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637684013 |
Product | signal transduction histidine kinase |
Protein accession | YP_288390 |
Protein GI | 72160733 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.982298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGACA GCCGAGTGGG GGTGTGGCGG GAACGCCTGG TCGCCGTGCT TTCCCTGTTG ACCTCGTTCG CGCTGGCTCC CGTCTCCCTT GTGCCGGCCG CGCTGCTGGC GGTCATGGTG GGCGCCTTGT CGTCCACGAC CGTCGAGGTG GTGCGCGGCA CGACTCCTGC GGACTGGCGT CTGCTGCTCC TCTCCGCCGC CACCCTGGGG TCGGTCCCCG TGGCCACGCT CCTGGCCCGG CTGGGAGTGC ACATCCACAA ACGGCGGGCG GGGGCCCTGT TCGGCATCGT GGAGACCACG GTTCCCGCGG GAGACGGGAC GCTCCGACTG CTCCGCGGCA TCGGGTTCGT GGTCGGCCGG GACGCCTGGG CCGCGGTGGG GCACACCACG GTGATCGGAC TCGCCGGGCT GCTGTTCGGC GGGCTTGCCG TGCTGTTGAT CGCCTATGGG GCGGGCGGGG TGATCGGTGG GATCGGCGCG CTCGCCGCCA CTCTCCTCAC GAGCGGATCG GTGCAGGTCA CCGGTATGGC CTTGGTGGTG GCGGTGCTCG TGGCGGGGCC TCCCCTGGTG GTGGCCGGAC TGTGGGTTGC GCCCTGGCTG GTGCGGCTCG ACCTCGCCGT GATGCGACGG ACCCTGTTCG ACTCTCCCCA GGTGCGTGTC CGCCGTCGGT TGTGGGAGCT GAGCGACACC CGTTCCCGCA TGGTGGACGC GGCCGAAGCG GAACGCCGCC GGATCGAACG GGACTTGCAC GACGGTGCGC AGCAGCGGCT GCTGTCCCTC ACGCTGACCT TGGCACGGGC GCGCGCCAAA TTCGACCGCG ACCCGGAGCA GGCTCGGGAA CTGGTGGAGG AAGCCCAGCG CGAAGCCCGG GCAGTGATGG CGGAACTGCG GGAGGTGGCC CGCGGGCTAC ACCCGAAGGT CCTCACCGAC CATGGGCTTG ACGCCGCGCT CCCTGTGGCT GCCGGACGGT GCCCGGTGCC GGTCCGTCTC GAAGTGCACC TCGACGAACG ACCGTCGCCA CGGGCTGAAG GCGTCGCCTA CTACGTGGTC TGCGAGGCGC TCACCAACGT GGCCAAGCAT GCGCAGGCGT CCGCGGTCAC GGTCCGGGCC GAACGGATTC GGCGCCGCCG GGACGACCTG CTCCGCATCA CCGTCATCGA CAACGGCCGC GGAGGCGCCG ACCCGCAGTC CGGCACCGGG CTGCACGGAC TGTCCGACCG GGTCGAGGCG GTCGACGGTG AACTGTTCAT CCACAGTCCG CCCGGTGAGG GCACGGTCCT CACCGCTGAC ATTCCGTGGA GGGCGTAA
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Protein sequence | MADSRVGVWR ERLVAVLSLL TSFALAPVSL VPAALLAVMV GALSSTTVEV VRGTTPADWR LLLLSAATLG SVPVATLLAR LGVHIHKRRA GALFGIVETT VPAGDGTLRL LRGIGFVVGR DAWAAVGHTT VIGLAGLLFG GLAVLLIAYG AGGVIGGIGA LAATLLTSGS VQVTGMALVV AVLVAGPPLV VAGLWVAPWL VRLDLAVMRR TLFDSPQVRV RRRLWELSDT RSRMVDAAEA ERRRIERDLH DGAQQRLLSL TLTLARARAK FDRDPEQARE LVEEAQREAR AVMAELREVA RGLHPKVLTD HGLDAALPVA AGRCPVPVRL EVHLDERPSP RAEGVAYYVV CEALTNVAKH AQASAVTVRA ERIRRRRDDL LRITVIDNGR GGADPQSGTG LHGLSDRVEA VDGELFIHSP PGEGTVLTAD IPWRA
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