Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0301 |
Symbol | |
ID | 3579974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 338679 |
End bp | 339944 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637683985 |
Product | diaminobutyrate--2-oxoglutarate aminotransferase |
Protein accession | YP_288362 |
Protein GI | 72160705 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases [TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCT TCTCCCGACT CGAGTCCGAA GTCCGCAGCT ACTGCCGGGG ATGGCCCACC CTCTTCACCC GGGCACGCGG CAGCCGCGTC TACGACCACA CCGGCCGCGG CTACCTCGAC TTCTTCGCCG GAGCCGGAGC GCTCAACTAC GGCCACAACA ATCCGACACT CAAAACCGCG CTGCTGGACT ACCTCGGCAG CGACTCGATC GTCCACAGCC TGGACGCCGC CACCACCGCT AAACGCGACT TCCTCGACAC CTTCGAGGAG GTGATCCTCA AACCCCGCGG CCTGGACTAC AAAGTGCAGT TCCCCGGACC GACGGGCACC AACGCGGTCG AGGCCGCCCT CAAACTCGCC CGCAAAGTCA CCGGCCGGGA GACGGTGATC AGCTTCACCA ACAGCTTCCA CGGCATGACG CTGGGCGCGC TCGCGGTGAC TGGCAACTCC ATGAAGCGCG GAGGGGCGGG AGTGCCCCTC AACCACACCG TCACCATGCC CTTCGACAAC TACATGGACG GGCAGGTCCC CGACTTCCTG TGGCTCCGCA GCCTGCTGGA AGACAGCGGC AGCGGCCTGG ACCGGCCCGC CGCCGTCATC GTGGAGACGG TGCAGGGCGA AGGCGGGATC AACGTGGCCA GAGCGGACTG GCTGCGCGGC CTGGCGGAGC TGTGCCGGGA GCACGAACTG CTGCTCATCG TCGACGACAT CCAGATGGGC TGCGGCCGGA CCGGTCCCTT CTTCAGCTTC GAGGAAGCCG GGATCGTGCC GGACATCGTC ACCTTGTCGA AGTCGATCAG CGGCTACGGC CTGCCCATGG CGCTGACCCT GTTCAAACGG GAACTGGACG TGTGGGAGCC CGGAGAGCAC AACGGTACGT TCCGCGGGTT CAACCCGGCT TTCCTCACCG CCACCGTGGC GCTCAACACC TACTGGCGCG ACGACTCCCT CGAGCGGGAG ACCCTGGCCA AGGGGCAGCT CATCACCGAG CGGCTCGAGG CGATCGCTGC CGAGCATGCG GAGGCCGGGG CGAGCGTCCG CGGCCGCGGC ATGGCCTGCG GCCTGGTGCT GCCGGGTGAA GGCGACGCGC GGCGGGTGTG CGCCGAAGCG TTCGAACGCG GTCTGCTCAT GGAGACGTCC GGGCCCGAGG ACGAGGTGGC CAAACTGCTG CCTCCGCTCA CTACTTCCGT CGCCGAAATG GAGGAAGGGC TGGACATCCT CGCCGAGTCG GTGCGTGCTG CGGTTCGCAC CCCCCAGCCC GCCTGA
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Protein sequence | METFSRLESE VRSYCRGWPT LFTRARGSRV YDHTGRGYLD FFAGAGALNY GHNNPTLKTA LLDYLGSDSI VHSLDAATTA KRDFLDTFEE VILKPRGLDY KVQFPGPTGT NAVEAALKLA RKVTGRETVI SFTNSFHGMT LGALAVTGNS MKRGGAGVPL NHTVTMPFDN YMDGQVPDFL WLRSLLEDSG SGLDRPAAVI VETVQGEGGI NVARADWLRG LAELCREHEL LLIVDDIQMG CGRTGPFFSF EEAGIVPDIV TLSKSISGYG LPMALTLFKR ELDVWEPGEH NGTFRGFNPA FLTATVALNT YWRDDSLERE TLAKGQLITE RLEAIAAEHA EAGASVRGRG MACGLVLPGE GDARRVCAEA FERGLLMETS GPEDEVAKLL PPLTTSVAEM EEGLDILAES VRAAVRTPQP A
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