Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0282 |
Symbol | |
ID | 3578879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 315345 |
End bp | 316208 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637683966 |
Product | polyamine ABC-transporter, inner membrane subunit |
Protein accession | YP_288343 |
Protein GI | 72160686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACGGT TGCTGAACAG GGCCGCCCCC TACCTGCTGG CGCTGCCCGC CTGGATCTGG CTAGGTCTCT TCTTCGTAGT GCCGATCGTC GGCCTGCTGT GGATGTCCCT GATGACCGGA AACATCATCG TGGGGTTCCA GCAGACCTTC AACGTCGGCA TCTACCCGGA AGTGATCACC ACCTACTGGG AGCACATCCT GCGCTCCCTC GGGTATGGAC TGGCCGCCAC CCTACTGTGC ATCGCCATCG GCTACCCGGT GGCCTACTGG ATCGCCTTCC ACGGTGGCGC CCACAAGTCC ACCTACCTTC TCCTCCTCCT ACTTCCGTTC TTCGTGACCC AGGTGCTGCG CACCATCTCC TGGAAGTTCC TGCTTGCCGA CGACGGCCTG ATCCTGGGGA CGCTCAAAGC CATCCACCTG CTGCCGCAGG ATGCGCGCGT CCTCAGCACC TCGATCGCGG TCATCTTCGG ACTGGCATAC ACCTTCCTGC CGTTCATGGT CCTGCCGATC TACGCGGTGC TGGAACAGGT GGACCACAGG GTCGTGGAAG CCGCCTACGA CCTGTACGCG TCCCGATTCC ACGCGTTCGT CCACGTGATC CTGCCGATGT CCCTGCCCGG TGTCTTCGCC GGCGTCCTGC TGGTCTTCGT GCCTAGCAGC GCCGACTACG TCACCGCATG GGTGCTCGGC GGCACGCACA ACACCATGAT CGGCAACGTC ATCCAGTCGC AGTACTTGGT CAACAACGCG TACCCGACCG CCGCGGCCAT TACCTTCGTG CTGATGTCGG TCCTGCTCAT CGGGATCTTC AGCTACGCCA AGGCGCTGGG GACTGAACGG GTGATGGAGG TGCAGGCGGG ATGA
|
Protein sequence | MTRLLNRAAP YLLALPAWIW LGLFFVVPIV GLLWMSLMTG NIIVGFQQTF NVGIYPEVIT TYWEHILRSL GYGLAATLLC IAIGYPVAYW IAFHGGAHKS TYLLLLLLPF FVTQVLRTIS WKFLLADDGL ILGTLKAIHL LPQDARVLST SIAVIFGLAY TFLPFMVLPI YAVLEQVDHR VVEAAYDLYA SRFHAFVHVI LPMSLPGVFA GVLLVFVPSS ADYVTAWVLG GTHNTMIGNV IQSQYLVNNA YPTAAAITFV LMSVLLIGIF SYAKALGTER VMEVQAG
|
| |