| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0200 |
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| Symbol | |
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| ID | 3579969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 226000 |
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| End bp | 228603 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637683883 |
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| Product | ATPase |
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| Protein accession | YP_288261 |
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| Protein GI | 72160604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.371355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA AGCTCACCAG GAAGAGTCAG GAGGCGTTGT CCGCGGCAAT CCGGAGGGCA
ACCGCGGACG GTAACCCCCA GGTCGAACCG GTGCACCTGC TGTCTGCCCT GATCGGCCAG
GCTGAAGGAG TCGTCCGGCC CCTGCTCAAA GAGGTGGGGG CCGATCCAGG CAGGCTCAGC
ACCAAGGTGG AAGAGGAGAT CGCCCGACTG CCTCGCGCGT CGGGGAGTAC GGTCAACGCG
CCGGCGAGCT CCCGGCAGCT CATCATTTCG CTGAACACGG CGGCCCAGCG CGCCAAGCAG
ATGGAGGACG AGTACGTCTC CACCGAGCAC CTGCTGGTCG GGCTGGCCGC GGACGGGGGG
ACGGCAGCCA CCCTGCTGCG GGAGGCAGGC GCGACACCGG AAGCGCTGCT GGACGCGTTC
AGCCGGGTGC GGGGCAGCGC CCGTGTCACT TCGGAGACCC CGGAAGACAC CTACCAGGCG
CTCGAGAAGT ACGGGGTGGA CCTCACCCAG CGGGCCCGCG AAGGCAAACT GGACCCGGTT
ATCGGCAGAG ACGCGGAGAT CCGCCGGGTG ATCCAGGTGC TGTCCCGGCG CACCAAGAAC
AACCCGGTGC TCATTGGTGA ACCGGGTGTC GGCAAGACCG CGGTGGTCGA GGGCCTCGCC
CAGCGTATTG TCGCCGGCGA CGTCCCCGAG TCGCTGCGCG ACAAGCGGCT GATCTCGCTG
GACTTGCCCG CGATGGTGGC GGGTGCCAAG TACCGGGGCG AGTTCGAGGA GCGGCTCAAA
GCGGTCCTCA ACGAGATCAA GCAGAGCGAA GGGCAGATCA TCACGTTCAT CGACGAGCTG
CACACCGTGG TCGGCGCGGG TGCGGCCGAG GGGGCGATGG ACGCGGGCAA CATGCTCAAG
CCCATGCTGG CCCGAGGCGA ACTGCGCATG GTCGGGGCGA CCACGCTCGA CGAGTACCGC
GAACGCATCG AGAAGGACCC GGCGCTGGAG CGGCGGTTCC AGCAGGTGAT GGTGAACGAG
CCGTCCGCGG CCGACACGAT CGCGATCCTG CGCGGCCTCA AGGGCCGTTA CGAGGCGCAC
CACAAGGTGC AGATCGCCGA CTCGGCGCTG GTGGCGGCGG CGACCCTGTC CGACCGGTAC
ATCACTGCCC GGTTCCTGCC GGACAAGGCC ATCGACTTGA TCGACGAGGC AGCATCCCGG
CTGCGCATGG AGATCGACTC CCAGCCGGTG GAGATCGACG AACTGCAGCG CGTGGTCGAC
CGGCTCAAGA TGGAGGAGAT GGCGTTGAGC AAGGAGTCCG ACGCCGCCTC CAAGCAGCGG
CTGGAACGGC TGCGCGCCGA CCTCGCCGAC AAGGAGGAGC AGCTCAATGC GCTCATCGCC
CGCTGGGAGC AGGAGAAGGC CGGGCTCAAC CGGGTCGGTG AGCTCAAGGA GAAGCTGGAT
GAGCTGCGGG GCCAGGCCGA ACGCGCCCAG CGCGACGGCG ACTTCGAGGA AGCCTCCCGG
TTGATGTACG GGGAGATCCC GCAACTGGAG CGGCAGTTGG AGGAGGCTCT CTCCGAGGAA
GACTCGGCCG AGCACGCTAC CATGGTCAAG GAGGAGGTCG GCGCCGACGA CGTGGCCGAT
GTGGTGTCGT CGTGGACCGG TATCCCCGTG GGGCGGCTCA TGGAGGGGGA GAGCGCCAAG
CTGCTCCGGA TGGAGGAGGA GATCGGAAAG CGCCTGATCG GGCAGCGGCG CGCTGTGGCC
GCCGTCTCCG ATGCGGTGCG GCGGGCCCGC GCGGGGATCT CCGACCCTGA CCGGCCGACC
GGCTCCTTCC TGTTCCTCGG CCCCACCGGC GTGGGTAAGA CGGAGCTGGC GAAGGCGCTC
GCCGAGTTCC TGTTCGACGA CGAGCGCGCG ATTGTGCGCC TCGACATGAG CGAGTACTCC
GAGAAGCACT CGGTGGCCCG ACTGGTCGGT GCGCCCCCCG GCTACGTCGG CTACGAGGAG
GGCGGCCAGC TCACCGAGGC GGTGCGGCGG CGCCCCTACA CGGTGGTGCT GCTCGACGAG
GTGGAGAAGG CCCACATCGA GGTCTTCGAC ACCCTGCTGC AGGTCTTGGA CGACGGGCGG
CTCACCGACG GGCAGGGCCG CCAGGTGGAC TTCCGCAACA CGCTGCTGAT CCTGACCTCC
AACCTGGGGT CGCAGTTCCT CATCGACCCC ACGCTGGACG ACGCCCAGCG GCACGAGAAG
GTCATGCAGG TGGTGCGGAA CACCTTCAAA CCGGAGTTCT TGAACCGGTT GGACGACGTG
ATCGTGTTCG ACGCGCTGTC CACCGACGAC CTGACCAAGA TCGTCGACCT GCAGGTGGAT
CGGCTGGCCC GGCGGCTGGC GGACCGGAGG CTCAAGCTGG AGGTCACTCC GGCTGCCCGC
GAGTGGCTGG CGCTGGCCGG CTACGACCCG GTCTACGGTG CGCGTCCGCT GCGGCGGCTG
GTGCAGACCG CGATCGGCGA CCCGCTGGCC CGGGAACTGC TGGCGGGCAA CCTCGTTGAG
GGCGACACAG TCCGGGTGGA TGTGGACGAG TCCAAGGATT CGTTGACAGT GGGTCCGGTG
AAGGAGCCCG CGTCCGCCGC ATAA
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| Protein sequence | MDYKLTRKSQ EALSAAIRRA TADGNPQVEP VHLLSALIGQ AEGVVRPLLK EVGADPGRLS
TKVEEEIARL PRASGSTVNA PASSRQLIIS LNTAAQRAKQ MEDEYVSTEH LLVGLAADGG
TAATLLREAG ATPEALLDAF SRVRGSARVT SETPEDTYQA LEKYGVDLTQ RAREGKLDPV
IGRDAEIRRV IQVLSRRTKN NPVLIGEPGV GKTAVVEGLA QRIVAGDVPE SLRDKRLISL
DLPAMVAGAK YRGEFEERLK AVLNEIKQSE GQIITFIDEL HTVVGAGAAE GAMDAGNMLK
PMLARGELRM VGATTLDEYR ERIEKDPALE RRFQQVMVNE PSAADTIAIL RGLKGRYEAH
HKVQIADSAL VAAATLSDRY ITARFLPDKA IDLIDEAASR LRMEIDSQPV EIDELQRVVD
RLKMEEMALS KESDAASKQR LERLRADLAD KEEQLNALIA RWEQEKAGLN RVGELKEKLD
ELRGQAERAQ RDGDFEEASR LMYGEIPQLE RQLEEALSEE DSAEHATMVK EEVGADDVAD
VVSSWTGIPV GRLMEGESAK LLRMEEEIGK RLIGQRRAVA AVSDAVRRAR AGISDPDRPT
GSFLFLGPTG VGKTELAKAL AEFLFDDERA IVRLDMSEYS EKHSVARLVG APPGYVGYEE
GGQLTEAVRR RPYTVVLLDE VEKAHIEVFD TLLQVLDDGR LTDGQGRQVD FRNTLLILTS
NLGSQFLIDP TLDDAQRHEK VMQVVRNTFK PEFLNRLDDV IVFDALSTDD LTKIVDLQVD
RLARRLADRR LKLEVTPAAR EWLALAGYDP VYGARPLRRL VQTAIGDPLA RELLAGNLVE
GDTVRVDVDE SKDSLTVGPV KEPASAA
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