Gene Tfu_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0190 
Symbol 
ID3579959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp212622 
End bp213329 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID637683873 
Productcell wall-associated hydrolase (invasion-associated proteins) 
Protein accessionYP_288251 
Protein GI72160594 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCGGC GTGACACGCC GATCTGCTTT TTATATCCGT CGTCGCAGTG TCCTTGTGTT 
TCGGTTGGCA GCGTCATCCC CTTCCACACG ACGAATGTGT CCTTTGTCTA CATATCGAGG
GAAGACACCA TGCTCTGCAA CGAGGGTTTC GGTCGGTCTC CACGAGGCAA CGCTTCGCGT
CTCATCGGCC GGGCCGCCAC GGCCTTCTCC GCCCTGGCGT TGGCCGCCAC GATCAGCGTC
GCGAACGCCA CCCCGGTCAC CGGTGCCGCA CACCGCGTGG ACCCGGCAGC GGACTCCTCG
CAGGAAGACC AGCACGTTCG CAGCGGGAAG GGCAGCGGGA AAGGCAGCCA GAGCATCGCC
CAGGAGGCGG TGCGCTATGC CGAAAGCAAG ATCGGCGCCC CCTATCGCTG GGGGGCAGCC
GGCCCGGACG CTTTTGACTG TTCCGGCCTC GTGCAATGGT CATACAGACA GGTGGGGGTG
ACCCTCAAAC GCACGACCTA CGACCAGGCC ACCCAGGGCA AACCGGTATC CCGTTCCCAG
CTCCGCCCAG GTGACCTGGT CTTTTTCTAC TCCGGGCCGA GCCATGTCGC CCTCTATGTC
GGCGACAACC AGATCATCCA CGCGCCCGGA AGCGGCAAGA CCGTCCAGAT CGTCTCCATG
TCCGGCCACT ACGAGGAGAA CTTCAACTCC GCGCGCCGGG TCGTCTAA
 
Protein sequence
MIRRDTPICF LYPSSQCPCV SVGSVIPFHT TNVSFVYISR EDTMLCNEGF GRSPRGNASR 
LIGRAATAFS ALALAATISV ANATPVTGAA HRVDPAADSS QEDQHVRSGK GSGKGSQSIA
QEAVRYAESK IGAPYRWGAA GPDAFDCSGL VQWSYRQVGV TLKRTTYDQA TQGKPVSRSQ
LRPGDLVFFY SGPSHVALYV GDNQIIHAPG SGKTVQIVSM SGHYEENFNS ARRVV