Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0190 |
Symbol | |
ID | 3579959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 212622 |
End bp | 213329 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637683873 |
Product | cell wall-associated hydrolase (invasion-associated proteins) |
Protein accession | YP_288251 |
Protein GI | 72160594 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCGGC GTGACACGCC GATCTGCTTT TTATATCCGT CGTCGCAGTG TCCTTGTGTT TCGGTTGGCA GCGTCATCCC CTTCCACACG ACGAATGTGT CCTTTGTCTA CATATCGAGG GAAGACACCA TGCTCTGCAA CGAGGGTTTC GGTCGGTCTC CACGAGGCAA CGCTTCGCGT CTCATCGGCC GGGCCGCCAC GGCCTTCTCC GCCCTGGCGT TGGCCGCCAC GATCAGCGTC GCGAACGCCA CCCCGGTCAC CGGTGCCGCA CACCGCGTGG ACCCGGCAGC GGACTCCTCG CAGGAAGACC AGCACGTTCG CAGCGGGAAG GGCAGCGGGA AAGGCAGCCA GAGCATCGCC CAGGAGGCGG TGCGCTATGC CGAAAGCAAG ATCGGCGCCC CCTATCGCTG GGGGGCAGCC GGCCCGGACG CTTTTGACTG TTCCGGCCTC GTGCAATGGT CATACAGACA GGTGGGGGTG ACCCTCAAAC GCACGACCTA CGACCAGGCC ACCCAGGGCA AACCGGTATC CCGTTCCCAG CTCCGCCCAG GTGACCTGGT CTTTTTCTAC TCCGGGCCGA GCCATGTCGC CCTCTATGTC GGCGACAACC AGATCATCCA CGCGCCCGGA AGCGGCAAGA CCGTCCAGAT CGTCTCCATG TCCGGCCACT ACGAGGAGAA CTTCAACTCC GCGCGCCGGG TCGTCTAA
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Protein sequence | MIRRDTPICF LYPSSQCPCV SVGSVIPFHT TNVSFVYISR EDTMLCNEGF GRSPRGNASR LIGRAATAFS ALALAATISV ANATPVTGAA HRVDPAADSS QEDQHVRSGK GSGKGSQSIA QEAVRYAESK IGAPYRWGAA GPDAFDCSGL VQWSYRQVGV TLKRTTYDQA TQGKPVSRSQ LRPGDLVFFY SGPSHVALYV GDNQIIHAPG SGKTVQIVSM SGHYEENFNS ARRVV
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