Gene Tfu_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0121 
Symbol 
ID3579738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp144426 
End bp144971 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID637683804 
Producthypothetical protein 
Protein accessionYP_288182 
Protein GI72160525 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.498066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTTG TCCAACTCAC GATTAGCGCG CTGCCCGCGC ATGTCCGCAC CGCCAGGCTC 
ATGGCTACGG CCGTGGCCCG GCGGGCGGGT GTCAGCGAGT CGACCCTCGA CGAGATTCGC
CTGGCCGTGG GCGAGGCGTG CTCCCGCGCC GTGGAGGCTC ATCGCACCCA CTGCCCCGAC
CAGCCGATCA AGCTGGAGTT GATCGACAGT TCCGGCCCGA CGGGACCCGG TGGCCCCTCA
GGTCCCGATC GGATCAACGG CAGCCGTTCC GGCCGCTTCG AAGTGGTCGT TTCCGACCAC
GCCCCAGCCA AGGAGAACGG CGCTCCAGCG TTCAACGGTT TCGAGGGCGG GCCGCACGCT
TCGCTCGGTG AATCCCTCAC CTCAGGCGGG TTCGGCGGAT TGTCACCTGA TGTCGGCCTT
GCCGTCATCC GCGGTTTGGC TGACGAGGTG AGTATCGAAC CCAGCGAGAA CGGCACGGTG
ATCCGCATGA GCTGGCCGTT GGCCAGTAAC GAGGCGGACA TCTCCGAGGC GCATGGACTC
GACTGA
 
Protein sequence
MAVVQLTISA LPAHVRTARL MATAVARRAG VSESTLDEIR LAVGEACSRA VEAHRTHCPD 
QPIKLELIDS SGPTGPGGPS GPDRINGSRS GRFEVVVSDH APAKENGAPA FNGFEGGPHA
SLGESLTSGG FGGLSPDVGL AVIRGLADEV SIEPSENGTV IRMSWPLASN EADISEAHGL
D