Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0121 |
Symbol | |
ID | 3579738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 144426 |
End bp | 144971 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683804 |
Product | hypothetical protein |
Protein accession | YP_288182 |
Protein GI | 72160525 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.498066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTG TCCAACTCAC GATTAGCGCG CTGCCCGCGC ATGTCCGCAC CGCCAGGCTC ATGGCTACGG CCGTGGCCCG GCGGGCGGGT GTCAGCGAGT CGACCCTCGA CGAGATTCGC CTGGCCGTGG GCGAGGCGTG CTCCCGCGCC GTGGAGGCTC ATCGCACCCA CTGCCCCGAC CAGCCGATCA AGCTGGAGTT GATCGACAGT TCCGGCCCGA CGGGACCCGG TGGCCCCTCA GGTCCCGATC GGATCAACGG CAGCCGTTCC GGCCGCTTCG AAGTGGTCGT TTCCGACCAC GCCCCAGCCA AGGAGAACGG CGCTCCAGCG TTCAACGGTT TCGAGGGCGG GCCGCACGCT TCGCTCGGTG AATCCCTCAC CTCAGGCGGG TTCGGCGGAT TGTCACCTGA TGTCGGCCTT GCCGTCATCC GCGGTTTGGC TGACGAGGTG AGTATCGAAC CCAGCGAGAA CGGCACGGTG ATCCGCATGA GCTGGCCGTT GGCCAGTAAC GAGGCGGACA TCTCCGAGGC GCATGGACTC GACTGA
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Protein sequence | MAVVQLTISA LPAHVRTARL MATAVARRAG VSESTLDEIR LAVGEACSRA VEAHRTHCPD QPIKLELIDS SGPTGPGGPS GPDRINGSRS GRFEVVVSDH APAKENGAPA FNGFEGGPHA SLGESLTSGG FGGLSPDVGL AVIRGLADEV SIEPSENGTV IRMSWPLASN EADISEAHGL D
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