Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0100 |
Symbol | |
ID | 3579679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 121094 |
End bp | 123427 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637683782 |
Product | RNA binding S1:resolvase, RNase H-like fold |
Protein accession | YP_288161 |
Protein GI | 72160504 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACGT CCATTCACCA GCGGATCGCC GAGGAGCTCG GGGTACGCGA ACGGCAGGTA CGGGCCGCAG TCGAACTGCT TGACGACGGC GCAACCGTGC CGTTCATCGC CCGCTACCGC AAAGAAGTCA CGGAGATGCT CGACGACGCC CAGTTGCGGG CGATCGAAGA GCGGCTGCGC TACCTGCGGG AACTGGAGGA ACGCCGCACC GTCATCCTGG AGTCGATCAA GGCGCAGGGC AAACTCACGC CCGAACTCGA AGCCGCGATC ATGGCCGCCG ACTCCAAGGC ACGCCTGGAA GACATCTACC TCCCCTACAA GCCGAAGCGC CGCACCAAGG CGCAGATCGC GCGCGAAGCC GGACTGGAGC CCTTGGCGGA CGCGCTGCTC AACGACCCCT CCCGCGACCC GCACGACCAG GCCGCCGCCT ACGTTGATGC GGACAAGGGG GTCGCGGACA CGGCTGCCGC ACTGGAAGGC GCCCGCGCCA TCCTGGTGGA ACGGTTCACC GAAGACGCCG ACCTCATCGG TGAACTGCGG GAACGCATGT GGCAGCGGGG CCGTCTCGTC TCGCGGGTGC GGGAAGGCAA GGAAGAAGTC GGCGTGAAGT TCGCCGACTA CTTCGACTTC GCCGAAGCGT TCACCACCCT GCCCTCCCAC CGGGTCCTGG CTCTGTTCCG CGGTGAGAAG GAAGAAGTCC TCGACCTCAC CCTGGAACCG GAAGAACCGG CAGAAGACCC GAGAGCCCGC AGCAGCTACG AGGTCCGCAT CGCCCAGCAC TTCGGTATCG CCGACCAGGG CCGTCCCGGG GACCGCTGGC TGTTGGACAC GGTCCGCTGG GCGTGGCGCA CCCGCATCCT CGTCCGTCTC GACATCGACC TGCGCTCCCG CCTCTGGCAG GAAGCCGAAG ACGAAGCAGT CCGGGTGTTC GCCGCCAACC TGCGCGACCT GCTGCTGGCC GCGCCCGCCG GCACCCGGCC CACCATCGGT CTCGACCCGG GCCTGCGCAC CGGGGTGAAG GTCGCTGTCG TGGACGGCAC CGGCAAAGTG GTGGACACCG CGACGATCTA CCCGCACGAA CCGCAGAAGC GCTGGGACGA GTCCATCGCC GTCCTGGCGG CGCTCGCCCA GAAGCACCGG GTGGAACTGG TCGCGATCGG TAACGGAACC GCGTCCCGCG AAACCGACCG TCTCGCCGCT GACCTGATCA AACGCCACCC GGAGCTGAAG CTCACCAAGG TGATGGTGTC GGAGGCCGGG GCGTCGGTGT ATTCGGCGTC CGCCTACGCT TCCCAGGAGC TTCCTGACTT GGACGTGTCG CTGCGCGGCG CTGTCTCTAT TGCACGACGA CTCCAGGACC CGCTCGCCGA GCTGGTTAAA ATCGACCCCA AGTCAATCGG GGTCGGCCAA TACCAGCACG ACGTGTCCGA GGTGAAACTG TCCCGCTCCT TGGACGCGGT CGTGGAAGAC TGCGTGAACG CGGTCGGCGT GGACGTGAAC ACCGCGTCGG TACCGCTGCT CAGCCGCGTT TCCGGTATCA CGGCGAGCCT GGCCCAGAAC ATCGTCGCCT ACCGTGACGC CAACGGGCCG TTCCGTACCC GTGCCCAACT GCGGGAAGTG CCGCGGTTGG GACCGAAAGC GTTCGAACAG TGCGCGGGTT TCCTGCGGAT TCCTGACGGG GACGACCCGT TGGACTCTTC AAGCGTCCAC CCGGAGGCGT ATCCGGTGGT GCGGCGCATC CTCGAGGCGA CCGGCCGGGA TATCCGGGCG CTCATCGGCG ACACGGACAC GCTGCGCTCG CTACGCCCCG ACGACTTCGT GGACGAGCGG TTCGGTCTGC CCACGGTGAC CGACATCCTC GCGGAGTTGG AGAAACCGGG CCGGGACCCG CGCCCCGAGT TCCAGACCGC AGCATTCCGG GACGGGGTGG AGGACATCAC CGACCTGGAA CCGGGCATGG TGCTGGAGGG CGTGGTCACC AACGTGGCGG CGTTCGGCGC GTTCGTGGAC GTGGGAGTGC ACCACGACGG CCTGGTGCAC GTCTCAGCGA TGTCGAAGAG TTTCGTCAAA GACCCGCGGG ACGTGGTCAA GCCCGGCGAC ATCGTGCGCG TCAAAGTGCT GGACGTGGAT GTGCGTCGCA AGCGGATCTC GCTGACTCTC CGCTTGGACG ATGAAGTGGA CCAGCGCAGT GGGGAGAACA ACCGCTCCGG CGGGGAGCGC CGGGAGCGGG GTGCGCCGCG GCGCGGGGAC CAGCGGCGGC AGCGCGGCGG CCGCGGCGAG CAGCAGCCCA TGGGGGCGAT GGCGGAAGCG CTGCGCCGCG CAGGCCTGGT GTAG
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Protein sequence | MTTSIHQRIA EELGVRERQV RAAVELLDDG ATVPFIARYR KEVTEMLDDA QLRAIEERLR YLRELEERRT VILESIKAQG KLTPELEAAI MAADSKARLE DIYLPYKPKR RTKAQIAREA GLEPLADALL NDPSRDPHDQ AAAYVDADKG VADTAAALEG ARAILVERFT EDADLIGELR ERMWQRGRLV SRVREGKEEV GVKFADYFDF AEAFTTLPSH RVLALFRGEK EEVLDLTLEP EEPAEDPRAR SSYEVRIAQH FGIADQGRPG DRWLLDTVRW AWRTRILVRL DIDLRSRLWQ EAEDEAVRVF AANLRDLLLA APAGTRPTIG LDPGLRTGVK VAVVDGTGKV VDTATIYPHE PQKRWDESIA VLAALAQKHR VELVAIGNGT ASRETDRLAA DLIKRHPELK LTKVMVSEAG ASVYSASAYA SQELPDLDVS LRGAVSIARR LQDPLAELVK IDPKSIGVGQ YQHDVSEVKL SRSLDAVVED CVNAVGVDVN TASVPLLSRV SGITASLAQN IVAYRDANGP FRTRAQLREV PRLGPKAFEQ CAGFLRIPDG DDPLDSSSVH PEAYPVVRRI LEATGRDIRA LIGDTDTLRS LRPDDFVDER FGLPTVTDIL AELEKPGRDP RPEFQTAAFR DGVEDITDLE PGMVLEGVVT NVAAFGAFVD VGVHHDGLVH VSAMSKSFVK DPRDVVKPGD IVRVKVLDVD VRRKRISLTL RLDDEVDQRS GENNRSGGER RERGAPRRGD QRRQRGGRGE QQPMGAMAEA LRRAGLV
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