| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0082 |
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| Symbol | |
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| ID | 3579716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 103048 |
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| End bp | 104292 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637683763 |
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| Product | esterase, PHB depolymerase |
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| Protein accession | YP_288143 |
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| Protein GI | 72160486 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCACC TGACCCGACG CATACCCGCC CGGGTATGGG TGGCGCTGAC CGCTGTCCTC
GGCCTGGGCG CCGCCCTTCT CGGCACCACT GCCCTCGCCC CCCGCGCGGA AGCCGCCACC
CTCACCCAGG TGTCCGCGTT CGGCTCCAAC CCGGGCAACC TGAACATGTA CGTCTACCGG
CCCGCCACCC TCCCCGACAA CGCCCCGCTC GTCGTCCTCC TCCACGGATG CTCCCAGGAC
GCCGCCACCT ACCACGCCCA CTCCGGCTGG GCCAAGTACG CCGACAGCCT CGGCTTCGCC
CTCGTCTACG CAGAGCAGAA ATCAGCGAAC AACAGCTCCT CGTGCTTCAA CTGGTTCCAG
AAGTCCGACA CGGCGCGCGG CTCCGGTGAA GCACAGTCCA TCCGCTCCAT GGTCGACTAC
GCGGTGCGCA CCTACAGCCT GGATGAGGAG CGCGTCTACA TCTCCGGCCT GTCCGCGGGC
GGCGCCATGG CCTCCGAGAT GCTCGCGGCC TACCCGGACG TGTTCGCCGG GGGAAGCATC
GTCGCCGGAA TCCCCACCGG CTGCGCCAGC AGCCTGCTGG ACGCGACCAC GTGCATGTTC
TCCGGCCGCA ACCTCACCCC CAAGCAGTGG GGCGACCTCG TGCGCGCTAA GAACCCGGGC
TGGCAGGGAC CGTGGCCGCG CGTCGCCATC TGGCACGGCA CCGCGGACGC GGTCGTGACC
CCCAAGAATG CGCAGTCCTC CCGCGACCAG TGGACCAACG TGTGGGGTAT CGGGCAAACC
CCCGCGCGGA CCGCCAACCT CGGAGCGAAC ACCACCGTCG AGTACTACCA GGACAGTTCC
GGACGCGACG TGGTCGCCCG CTACCTGGTC TCCGGCATGG GGCACGGCAC TCCCGTGGAC
CCGGGGTCCG GCACGGACCA GTGCGGCACC GCCGGCGCCT ACTTCCTCGA CACGATCTGC
TCCACCTACC ACACGATCCA GTTCTGGGAA CTCGACGGCG ATCCGCAGCC GTCCCCGTCC
CCTTCTCCGT CCCCGTCGCC CAGTCCGTCC CCGACCACTC CGCCCGCGGG GGAGTGCGTG
ACGGCGAACA ACTACCAGCA CGTGGCTGAA GGCCGCGCCT ACGTCAGCTA CGGCTACGCT
TACAGCGTGG GCGGCAACGA CCTGCTCGGC CTGTGGAACA TCTACGTCAT CACGTCCGTC
CAGGAAACCT CTCCCGGCTA CTGGGAGCGC GTATCCGGAT GCTGA
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| Protein sequence | MLHLTRRIPA RVWVALTAVL GLGAALLGTT ALAPRAEAAT LTQVSAFGSN PGNLNMYVYR
PATLPDNAPL VVLLHGCSQD AATYHAHSGW AKYADSLGFA LVYAEQKSAN NSSSCFNWFQ
KSDTARGSGE AQSIRSMVDY AVRTYSLDEE RVYISGLSAG GAMASEMLAA YPDVFAGGSI
VAGIPTGCAS SLLDATTCMF SGRNLTPKQW GDLVRAKNPG WQGPWPRVAI WHGTADAVVT
PKNAQSSRDQ WTNVWGIGQT PARTANLGAN TTVEYYQDSS GRDVVARYLV SGMGHGTPVD
PGSGTDQCGT AGAYFLDTIC STYHTIQFWE LDGDPQPSPS PSPSPSPSPS PTTPPAGECV
TANNYQHVAE GRAYVSYGYA YSVGGNDLLG LWNIYVITSV QETSPGYWER VSGC
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