Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0078 |
Symbol | |
ID | 3579712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 97989 |
End bp | 99113 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637683759 |
Product | branched-chain amino acid ABC transporter permease protein |
Protein accession | YP_288139 |
Protein GI | 72160482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.17119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTCG ACACCGACAC CAAGCACACA ACCGAGGCCC CTGCCGCCCC CGCCGCACCG GTCGCCGAGG CGGTGCGCCG CCCCCGGCGG GTTCCCGCGT GGGTGGCCCC GGCCGTGGTC GCGGTGGTGC TGCTGTCCCT GCCGTTTTCC ACGCTGCGGA TTCCCGGCCT GTTCGAAGGC ACTTTGAACA GCCCGTCCAC GCTGCACGTG CTCGCCACCT GCCTTGTCCT GGGCGGGCTC GCCACCAGCT ACGACCTGCT GTACGGGCGG GTGGGGCTGC TGTCGTTCGG GCACGCCCTC TACTTTGCGG CCGGCGCCTA CCTGGCGGTG CTGCTCATGG GGATTCTGGA GCTGCCGCTG CTGTGGTCGG CGCTGATCGC CGTGGCTTCC GGCACCCTGC TGGCCTTGGT GTTGGGCGCG ATCTCGCTGC GTGTCTCCGG CATCGCCCTG GCCATGGTGA CCTTGGCGTT CGCGCAGGCC GGGTCGATCC TGGTGGTCCG CGACCCGGGG CGGATGACCG GGGGCGAGGA AGGGCTGTCG CTCAACCCGG ACCTGGTGCC GGACGCGTTC ATCGGCGTGG TCAACACGGT CAACCTGTAC TGGCTGGCTG TCGGCTACGT GGTGGTGGCG CTGGGCGTGG TGTGGTGGCT GAGCGCCACC CCGGTGGGCC GGGTCTGGCA GGGGATTCGC GCCAACGAGC AGCGGGTCTC GGTGCTGGGC GTCAACCCTT ACCCGTACAA GCTGGCCGCG TTCACGGTCG CGGGCGCGCT CGCCTCCCTG GGCGGGGTGG TCTACCTGGT CGTGTCCGGC GGGGTCACTC CGGCGATCAC CACCGCCGAG TTCACGCTGA CCCTGCTGGT GATGGTGTCG CTGGGCGGCG CGGGCACCCG CTGGGGGCCC CTGGTGGGCG CGGTCGTCTA CACCTACGTC GACCACCGGC TGCTGCAGTT GGCGGCCTCG GACGTGTTCG ACGGTCTGCC CGCGGTGGTG CGCGCCCCGC TGAGCCAGCC GCTGTTCATC CTCGGCACGC TTTTCGTGCT GCTGGTGTTC TTCTTCCCCG GCGGGCTTGC CGCACTGCCT TCCCGGATCC ATGCGGCGCT GCGCCGCCGC GCCGCCGCGG CATAG
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Protein sequence | MNVDTDTKHT TEAPAAPAAP VAEAVRRPRR VPAWVAPAVV AVVLLSLPFS TLRIPGLFEG TLNSPSTLHV LATCLVLGGL ATSYDLLYGR VGLLSFGHAL YFAAGAYLAV LLMGILELPL LWSALIAVAS GTLLALVLGA ISLRVSGIAL AMVTLAFAQA GSILVVRDPG RMTGGEEGLS LNPDLVPDAF IGVVNTVNLY WLAVGYVVVA LGVVWWLSAT PVGRVWQGIR ANEQRVSVLG VNPYPYKLAA FTVAGALASL GGVVYLVVSG GVTPAITTAE FTLTLLVMVS LGGAGTRWGP LVGAVVYTYV DHRLLQLAAS DVFDGLPAVV RAPLSQPLFI LGTLFVLLVF FFPGGLAALP SRIHAALRRR AAAA
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