Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0006 |
Symbol | gyrB |
ID | 3579767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 6950 |
End bp | 8935 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637683686 |
Product | DNA gyrase subunit B |
Protein accession | YP_288069 |
Protein GI | 72160412 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.60604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCATGCG GATGGTCGGC GTCCCCGGGC AGGAGGGTGT TTCCAACTTT GGCCTACGAC GCGCGTTCAA TCACGGTTCT GGAAGGCCTC GAAGCGGTAC GCAAACGCCC CGGTATGTAC ATCGGATCCA CGGGCGAGCG CGGACTGCAC CACCTTGTCC AAGAGGTTGT GGACAACTCT GTGGACGAGG CGCTCGCCGG ATACGCGACC GCTATCGAGG TCACATTGCT CGCTGACGGC GGGGTCCGGG TCACCGACAA CGGACGGGGT ATCCCGGTCG ACCCGCACCC AGTAGAAAAG AAGCCCGCAG TAGAGCTTGT CCTCACCACC CTGCACGCGG GTGGCAAATT CGACAGCAAG TCCTACGCGG TCTCCGGCGG CCTGCACGGC GTCGGCGTCT CCGTCGTCAA CGCCTTGTCC ACCCGGCTCG AAGTCGAAGT CCGCCGGGAC GGCTACCTGT GGACCCAGAG CTACGAGATG ACCAAACCGG TCACCGAGCT CATCAGGCGG GAGCCCACCG ACGAGACCGG CACCCAGATC ACGTTCTGGC CGGACGGCTC CATCTTCGAA ACCACCACCT TCAACTTCGA GACGCTCTCC CGGCGGCTCC AGGAGATGGC GTTCCTCAAC AAGGGACTGT CCATCACCAT CCGAGACGAG CGTCCCGAAT TCGTCGGCGA CTCCCCGGTC ACCCAGACCT ACTACTACGA AGGCGGGCTG TCGGACTTCG TCCGCCACCT CAACGCCACC AAGGAGCCCG TCCACTCCTC CATCATCGCG TTCGAAGAAG CCGGCGACGG GATCGCCGTC GAGATCGCGA TGCAGTGGAA CCAGTCCTAC ACCTCCTCGG TGCACACCTT CGCCAACACC ATCAACACGG CTGAAGGCGG CACCCACGAA GAGGGCTTCC GCGCCGCACT CACCTCCATC GTCAACCGGT ACGCCCGCGA CCAGAAACTG CTGCGGGACA AGGACGAGAA CCTCACCGGC GACGACATCC GGGAAGGCCT CACCGCCATC GTCTCGGTGA AACTCGCCGA CCCCCAGTTC GAAGGCCAGA CCAAAACCAA ACTCGGCAAC ACCGAAGCCA AGTCCTTCGT CCAAAAGGTC TGCCACGAAT ACCTGCGGGA CTGGCTCGAC CGCAACCCGG GAGAAGCCAA AGACATCGTC ACCAAGGCGA CCCAGGCCGC CCGCGCCCGG ATCGCCGCCC GCCAAGCCCG GGAACTCACC CGGCGCAAGA CCCTGCTGGA GTCCACCTCA CTGCCCGGCA AGCTCGCAGA CTGCCAGTCC ACCGACCCGG AACGCTGCGA GGTCTACATC GTCGAGGGAG ACTCCGCCGG CGGCTCCGCC AAAGGCGGGC GTGACCCCTA CTACCAGGCG ATCCTCCCCA TCCGCGGCAA GATCCTCAAC GTCGAGAAAG CCCGCATCGA CCGGATCCTC AAAAACAACG AGGTCCAGGC GATCATCACC GCGCTGGGCA CGGGGATCCA CGACGACTTC GACATCACCA AGCTGCGGTA CCACAAGATC ATCCTCATGG CCGACGCCGA CGTCGACGGC CAGCACATCC GCACGCTGCT GCTCACCCTG CTGTTCCGCT TCATGAAACC GCTCATCGAA GCCGGACACG TCTACCTCGC GCAGCCCCCG CTCTACAAGA TCAAGTGGGA CCCCCGCGGA ACCGACGTCG ACTACGCCTA CTCCGACCGC GAACGCGACG AGAAGATCGC CGCCGGTATC GCAGCGGGCA AGAAGGACCC CCGGCCCCGC GACCTCGTCC AGCGCTTCAA AGGCCTGGGA GAGATGAACC CCAGCGAACT GTGGGAAACC ACCATGGACC CCGAACGGCG GGTGCTGCTG CAAGTGACGC TGGACGACGC AGCCCAGGCA GACGAAATGT TCAGCGTGCT CATGGGGGAA GACGTCGAAT CCCGACGCGC CTTCATCCAG CGCAACGCCC GGGACGTCCG TTTCCTGGAC ATCTAG
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Protein sequence | MSCGWSASPG RRVFPTLAYD ARSITVLEGL EAVRKRPGMY IGSTGERGLH HLVQEVVDNS VDEALAGYAT AIEVTLLADG GVRVTDNGRG IPVDPHPVEK KPAVELVLTT LHAGGKFDSK SYAVSGGLHG VGVSVVNALS TRLEVEVRRD GYLWTQSYEM TKPVTELIRR EPTDETGTQI TFWPDGSIFE TTTFNFETLS RRLQEMAFLN KGLSITIRDE RPEFVGDSPV TQTYYYEGGL SDFVRHLNAT KEPVHSSIIA FEEAGDGIAV EIAMQWNQSY TSSVHTFANT INTAEGGTHE EGFRAALTSI VNRYARDQKL LRDKDENLTG DDIREGLTAI VSVKLADPQF EGQTKTKLGN TEAKSFVQKV CHEYLRDWLD RNPGEAKDIV TKATQAARAR IAARQARELT RRKTLLESTS LPGKLADCQS TDPERCEVYI VEGDSAGGSA KGGRDPYYQA ILPIRGKILN VEKARIDRIL KNNEVQAIIT ALGTGIHDDF DITKLRYHKI ILMADADVDG QHIRTLLLTL LFRFMKPLIE AGHVYLAQPP LYKIKWDPRG TDVDYAYSDR ERDEKIAAGI AAGKKDPRPR DLVQRFKGLG EMNPSELWET TMDPERRVLL QVTLDDAAQA DEMFSVLMGE DVESRRAFIQ RNARDVRFLD I
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